RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 MAGEB17A8MXT2 336 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 FAM227AF5H4B4 570 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 TYROBPO43914 113 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 WFS1O76024 890 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 WISP2O76076 250 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 LDLRP01130 860 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 FHP07954 510 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 ICAM2P13598 275 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 MTHFD2P13995 350 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 EPORP19235 508 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 EEF1DP29692 281 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 GGT5P36269 586 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 AGTR2P50052 363 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 ARG2P78540 354 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 BTG2P78543 158 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 NSDHLQ15738 373 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 PDK4Q16654 411 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 TTMPQ5BVD1 217 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 CFAP157Q5JU67 520 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 ZYG11AQ6WRX3 759 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 MGARPQ8TDB4 240 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 TBC1D20Q96BZ9 403 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 AIF1LQ9BQI0 150 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 RNF32Q9H0A6 362 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 DNAJC11Q9NVH1 559 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 COPG2Q9UBF2 871 aa11.92□□□□□ -0.5
SEC61A1-206ENST00000491668 IGKV3D-11A0A0A0MRZ8 115 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 TRAV17A0A0B4J275 112 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 DYTNA2CJ06 578 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 A8MUI8 341 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 K7EPI3 171 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 STX16O14662 325 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 CLGNO14967 610 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 DLX3O60479 287 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 B4GALT2O60909 372 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 SERPINA6P08185 405 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 C1GALT1C1LP0DN25 315 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 EPB42P16452 691 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 GNAZP19086 355 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 CD22P20273 847 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 IL10P22301 178 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 HNRNPH1P31943 449 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 PIK3CGP48736 1102 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 ZNF33BQ06732 778 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 RGS1Q08116 209 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 RBBP5Q15291 538 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 BTBD16Q32M84 506 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 TOR1AIP1Q5JTV8 583 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 PAPD4Q6PIY7 484 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 LRRC70Q7Z2Q7 622 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 TEX9Q8N6V9 391 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 CCNYL1Q8N7R7 359 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 ATP6V1E2Q96A05 226 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 CAPS2Q9BXY5 557 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 MMP25Q9NPA2 562 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 AGPAT4Q9NRZ5 378 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 STMN3Q9NZ72 180 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 ZNF490Q9ULM2 529 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 CLDN16Q9Y5I7 305 aa11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 DIDO1Q9BTC0 2240 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-206ENST00000491668 A1L4Q6 167 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 LRIT2A6NDA9 550 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 OR5H15A6NDH6 313 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 G3V2L1 256 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 KLK8O60259 260 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 H2AFYO75367 372 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 SUPT7LO94864 414 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 SIX3O95343 332 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 CLDN1O95832 211 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 SBK3P0C264 359 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 EDN3P14138 238 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 MAOAP21397 527 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 MST1P26927 711 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 PRKAA2P54646 552 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 HERVK_113P63132 956 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 GTF2H2Q13888 395 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 RUNX2Q13950 521 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 SLBPQ14493 270 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 ACER2Q5QJU3 275 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 ABHD17BQ5VST6 288 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 GTF2H2CQ6P1K8 395 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 METTL2BQ6P1Q9 378 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 TMIGD1Q6UXZ0 262 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 ABHD13Q7L211 337 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 MYLK4Q86YV6 388 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 CRLF3Q8IUI8 442 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 C10orf107Q8IVU9 208 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 BEST3Q8N1M1 668 aa11.9□□□□□ -0.5
SEC61A1-206ENST00000491668 CA13Q8N1Q1 262 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms