RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CALM2P0DP24 149 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 CALM3P0DP25 149 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 MMP9P14780 707 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ZNF19P17023 458 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 GABRB1P18505 474 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SOX3P41225 446 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SUOXP51687 545 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 DHODHQ02127 395 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SP4Q02446 784 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ZNF177Q13360 481 aaPredicted RBP2.88□□□□□ -1.95
PHC3-213ENST00000491258 NR1D2Q14995 579 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 UBE2SQ16763 222 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 EPC2Q52LR7 807 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 CEP55Q53EZ4 464 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ALFQ53S48 1182 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 HAUS3Q68CZ6 603 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 IGFL3Q6UXB1 125 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 LEKR1Q6ZMV7 388 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 PXKQ7Z7A4 578 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 MYOCDQ8IZQ8 938 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SLC37A3Q8NCC5 494 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 CDHR1Q96JP9 859 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 PPM1MQ96MI6 270 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 LPAR4Q99677 370 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 YTHDF1Q9BYJ9 559 aaKnown RBP2.88□□□□□ -1.95
PHC3-213ENST00000491258 LRRC2Q9BYS8 371 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SMARCAD1Q9H4L7 1026 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 GKN1Q9NS71 199 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ORC3Q9UBD5 711 aaPredicted RBP2.88□□□□□ -1.95
PHC3-213ENST00000491258 ABCD2Q9UBJ2 740 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 AASSQ9UDR5 926 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 SEC63Q9UGP8 760 aaKnown RBP2.88□□□□□ -1.95
PHC3-213ENST00000491258 CEP290O15078 2479 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 NRCAMQ92823 1304 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
PHC3-213ENST00000491258 ANKRD11Q6UB99 2663 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 PSME4Q14997 1843 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 FLNBO75369 2602 aaKnown RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 SMCO2A6NFE2 343 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 MYO1GB0I1T2 1018 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 FAM220BPB1ANY3 271 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 C5orf67F2Z3F1 127 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 G3V2L1 256 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 H0Y9J4 135 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 OR10H2O60403 315 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 CREG1O75629 220 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TMEM63AO94886 807 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 LY6G6DO95868 133 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 CCNE2O96020 404 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 THY1P04216 161 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 RB1P06400 928 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 GHRP10912 638 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 VPREB1P12018 145 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TNFAIP3P21580 790 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 PSMA4P25789 261 aaKnown RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 TCF7P36402 384 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 KHKP50053 298 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 MGAT3Q09327 533 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 ITGB3BPQ13352 177 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 KRT32Q14532 448 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TMEM132DQ14C87 1099 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 BMP2KLQ5H9B9 411 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TCEAL5Q5H9L2 206 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 JAKMIP3Q5VZ66 844 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 REG3GQ6UW15 175 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TMCO3Q6UWJ1 677 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 CCBE1Q6UXH8 406 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 FAM43BQ6ZT52 329 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 IKBIPQ70UQ0 350 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 PLPPR4Q7Z2D5 763 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 NUDT13Q86X67 352 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 RNF130Q86XS8 419 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 NME8Q8N427 588 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 OR5T2Q8NGG2 359 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 DNAJB3Q8WWF6 145 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 CRYGNQ8WXF5 182 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 MRPL38Q96DV4 380 aaKnown RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 TCEANC2Q96MN5 208 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 FAM218AQ96MZ4 157 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 C7orf26Q96N11 449 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 NEK1Q96PY6 1258 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 GLT8D2Q9H1C3 349 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 AZI2Q9H6S1 392 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 UBE2ZQ9H832 354 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 MTHFD2LQ9H903 347 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 JPT2Q9H910 190 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 TBC1D17Q9HA65 648 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.87□□□□□ -1.95
PHC3-213ENST00000491258 LNPEPQ9UIQ6 1025 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 IKZF3Q9UKT9 509 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 ZNF215Q9UL58 517 aaPredicted RBP2.87□□□□□ -1.95
PHC3-213ENST00000491258 NFASCO94856 1347 aa2.87□□□□□ -1.95
PHC3-213ENST00000491258 IGLV3-22A0A075B6J6 115 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 KLF18A0A0U1RQI7 1052 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 FAM86B1E9PN63 330 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 OGTO15294 1046 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 TEX28O15482 410 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 FAM86B2P0C5J1 330 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 MGMTP16455 207 aa2.86□□□□□ -1.95
PHC3-213ENST00000491258 CD52P31358 61 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms