RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MAGEB10Q96LZ2 347 aaPredicted RBP7.21□□□□□ -1.26
CLDN1-202ENST00000490800 PPM1MQ96MI6 270 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 CCT7Q99832 543 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 CCDC106Q9BWC9 280 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 XKR8Q9H6D3 395 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 KIR3DX1Q9H7L2 352 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 PDE7BQ9NP56 450 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 LHX9Q9NQ69 397 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 CCDC177Q9NQR7 707 aaPredicted RBP7.21□□□□□ -1.26
CLDN1-202ENST00000490800 FARSBQ9NSD9 589 aaKnown RBP7.21□□□□□ -1.26
CLDN1-202ENST00000490800 ARL8BQ9NVJ2 186 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 NOP53Q9NZM5 478 aaKnown RBP7.21□□□□□ -1.26
CLDN1-202ENST00000490800 GIMAP2Q9UG22 337 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 TUBD1Q9UJT1 453 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 RARRES3Q9UL19 164 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 G3BP2Q9UN86 482 aaKnown RBP7.21□□□□□ -1.26
CLDN1-202ENST00000490800 ICKQ9UPZ9 632 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 KCNE2Q9Y6J6 123 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 COLEC10Q9Y6Z7 277 aa7.21□□□□□ -1.26
CLDN1-202ENST00000490800 PIPSLA2A3N6 862 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 FAM221AA4D161 298 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 OR6C74A6NCV1 312 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 K7EM74 188 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CREG1O75629 220 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CBX6O95503 412 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 PDYNP01213 254 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 KRT6AP02538 564 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 KRT6BP04259 564 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ALDOCP09972 364 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 T-ENOLP0DO92 83 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CDH1P12830 882 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 LBPP18428 481 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 GNAZP19086 355 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 POLR2CP19387 275 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CCND1P24385 295 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 NDUFS1P28331 727 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 HNF4AP41235 474 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 KRT6CP48668 564 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 YBX1P67809 324 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 HSD11B2P80365 405 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ACY1Q03154 408 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 DMTNQ08495 405 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 KLF10Q13118 480 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ZRSR2Q15696 482 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 GPR19Q15760 415 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 IGFBP7Q16270 282 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 SGO1Q5FBB7 561 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 COLEC12Q5KU26 742 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CATSPEREQ5SY80 951 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ATG9BQ674R7 924 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ARMC6Q6NXE6 501 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 TMPRSS11BQ86T26 416 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 OOSP2Q86WS3 158 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 MYLK4Q86YV6 388 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 D2HGDHQ8N465 521 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 RAB42Q8N4Z0 105 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 C9orf43Q8TAL5 461 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CT55Q8WUE5 264 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 SLC5A11Q8WWX8 675 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 TUBGCP3Q96CW5 907 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 PTCD3Q96EY7 689 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 FCRL4Q96PJ5 515 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 HBEGFQ99075 208 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 MIPEPQ99797 713 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 HAUS8Q9BT25 410 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 RAB11FIP5Q9BXF6 653 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 TWSG1Q9GZX9 223 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 PCBD2Q9H0N5 130 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 EHD1Q9H4M9 534 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 PFDN4Q9NQP4 134 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ASH1LQ9NR48 2969 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 FGF21Q9NSA1 209 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 KCND3Q9UK17 655 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 ZNF490Q9ULM2 529 aaPredicted RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 SNX6Q9UNH7 406 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 SLC12A4Q9UP95 1085 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 CCL27Q9Y4X3 112 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 COPG1Q9Y678 874 aaKnown RBP7.2□□□□□ -1.26
CLDN1-202ENST00000490800 HEATR5BQ9P2D3 2071 aa7.2□□□□□ -1.26
CLDN1-202ENST00000490800 TLCD2A6NGC4 264 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 SLC9B1P1A6NJY1 282 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 H0YIV9 168 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 SLC28A1O00337 649 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 BTN3A3O00478 584 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 LSM1O15116 133 aaKnown RBP7.19□□□□□ -1.26
CLDN1-202ENST00000490800 UBDO15205 165 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 PRICKLE3O43900 615 aaPredicted RBP7.19□□□□□ -1.26
CLDN1-202ENST00000490800 PEX11AO75192 247 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 ULK1O75385 1050 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 SCRG1O75711 98 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 ZBTB11O95625 1053 aaPredicted RBP7.19□□□□□ -1.26
CLDN1-202ENST00000490800 C1GALT1C1LP0DN25 315 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 CD1EP15812 388 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 PIK3R1P27986 724 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 PSMB5P28074 263 aa7.19□□□□□ -1.26
CLDN1-202ENST00000490800 PEBP1P30086 187 aaKnown RBP7.19□□□□□ -1.26
CLDN1-202ENST00000490800 SHMT2P34897 504 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms