RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TSC22D4Q9Y3Q8 395 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 HIVEP1P15822 2718 aa11.02□□□□□ -0.65
SRSF4-204ENST00000489898 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 A0A1W2PS29 197 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 PINLYPA6NC86 204 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 A8MUI8 341 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 PRKRAO75569 313 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 UNC5CO95185 931 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 RASAL1O95294 804 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 C2P06681 752 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CASQ1P31415 396 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 STX2P32856 288 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 SOX18P35713 384 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 PLA2G16P53816 162 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 HSD17B7P56937 341 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 AP2B1P63010 937 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 HSF1Q00613 529 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CAV1Q03135 178 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 ILF2Q12905 390 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CHIT1Q13231 466 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 MRM1Q6IN84 353 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 GRHL2Q6ISB3 625 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 NIPAL1Q6NVV3 410 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 GALNTL5Q7Z4T8 443 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 MDGA2Q7Z553 956 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 FJX1Q86VR8 437 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CCDC25Q86WR0 208 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 RPS19BP1Q86WX3 136 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 TTLQ8NG68 377 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 OR7G3Q8NG95 312 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 DNAJB8Q8NHS0 232 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 RHEBL1Q8TAI7 183 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 THAP3Q8WTV1 239 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 PTPMT1Q8WUK0 201 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CDKL2Q92772 493 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 ANKRD9Q96BM1 317 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 MAGEB10Q96LZ2 347 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 C16orf45Q96MC5 204 aaPredicted RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 REXO4Q9GZR2 422 aaKnown RBP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.01□□□□□ -0.65
SRSF4-204ENST00000489898 RAB17Q9H0T7 212 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 EPB41L4BQ9H329 900 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 CDCP1Q9H5V8 836 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 ZBTB26Q9HCK0 441 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 HRH3Q9Y5N1 445 aa11.01□□□□□ -0.65
SRSF4-204ENST00000489898 TRBV11-1A0A0K0K1C0 115 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 K7EPI3 171 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 HRKO00198 91 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 PLPP1O14494 284 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 OR7A17O14581 309 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 FGF17O60258 216 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SLC25A12O75746 678 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 MYO1DO94832 1006 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SIX3O95343 332 aaPredicted RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 NADKO95544 446 aaPredicted RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 IGKV3-11P04433 115 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SP1P08047 785 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 LTA4HP09960 611 aaKnown RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 ATP5A1P25705 553 aaKnown RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 HNRNPH2P55795 449 aaKnown RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 STXBP1P61764 594 aaKnown RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 TRAF3Q13114 568 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 C3AR1Q16581 482 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 XKR6Q5GH73 641 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 C8orf74Q6P047 294 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 LYPD8Q6UX82 237 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 CLNKQ7Z7G1 428 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 CTAGE3PQ8IX95 158 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 MMGT1Q8N4V1 131 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SLC5A8Q8N695 610 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 WDR20Q8TBZ3 569 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SLC44A1Q8WWI5 657 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 NCLNQ969V3 563 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 SERINC2Q96SA4 455 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 ADAP2Q9NPF8 381 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 DMRT3Q9NQL9 472 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 KLHL1Q9NR64 748 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 TINAGQ9UJW2 476 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 ZNF225Q9UK10 706 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 RNF112Q9ULX5 631 aa11□□□□□ -0.65
SRSF4-204ENST00000489898 UTP11Q9Y3A2 253 aaKnown RBP11□□□□□ -0.65
SRSF4-204ENST00000489898 MYOCOSA0A1B0GUC4 107 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 A8MUA0 341 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 TMPRSS11DO60235 418 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 CCNT2O60583 730 aaKnown RBP10.99□□□□□ -0.65
SRSF4-204ENST00000489898 EEDO75530 441 aaKnown RBP10.99□□□□□ -0.65
SRSF4-204ENST00000489898 HIST1H1TP22492 207 aaPredicted RBP10.99□□□□□ -0.65
SRSF4-204ENST00000489898 PTGER1P34995 402 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 MSH2P43246 934 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 HLCSP50747 726 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 MTTPP55157 894 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 SKP1P63208 163 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 PCBP2Q15366 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
SRSF4-204ENST00000489898 CMPK2Q5EBM0 449 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 GFRALQ6UXV0 394 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 ZNF595Q8IYB9 648 aa10.99□□□□□ -0.65
SRSF4-204ENST00000489898 MARVELD2Q8N4S9 558 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms