RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OR13C5Q8NGS8 318 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 SEPT8Q92599 483 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 RFT1Q96AA3 541 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 CCM2Q9BSQ5 444 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 LRRCC1Q9C099 1032 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 STRADBQ9C0K7 418 aa4□□□□□ -1.77
CCDC39-206ENST00000489868 WDR46O15213 610 aaKnown RBP3.99□□□□□ -1.77
CCDC39-206ENST00000489868 IGHG1P01857 330 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 HCKP08631 526 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 ACKR3P25106 362 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 PEX3P56589 373 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 CCL14Q16627 93 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 AGAP7PQ5VUJ5 663 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 RFPL4BQ6ZWI9 263 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 MARCH9Q86YJ5 346 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 KLHL7Q8IXQ5 586 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 C4orf19Q8IY42 314 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 CITED2Q99967 270 aaPredicted RBP3.99□□□□□ -1.77
CCDC39-206ENST00000489868 GPR173Q9NS66 373 aa3.99□□□□□ -1.77
CCDC39-206ENST00000489868 NIP7Q9Y221 180 aaKnown RBP eCLIP3.99□□□□□ -1.77
CCDC39-206ENST00000489868 C2orf92A0A1B0GVN3 265 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 GTPBP10A4D1E9 387 aaKnown RBP3.98□□□□□ -1.77
CCDC39-206ENST00000489868 FBP2O00757 339 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 IGHG3P01860 377 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 SOAT1P35610 550 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 RBBP4Q09028 425 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 PEX6Q13608 980 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ARMC3Q5W041 872 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 GALNTL5Q7Z4T8 443 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 NLRP14Q86W24 1093 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 CACUL1Q86Y37 369 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ZPLD1Q8TCW7 415 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 CKAP2Q8WWK9 683 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 RCHY1Q96PM5 261 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF559Q9BR84 538 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 MLPHQ9BV36 600 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-206ENST00000489868 LIME1Q9H400 295 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 SRD5A3Q9H8P0 318 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 THYN1Q9P016 225 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF107Q9UII5 783 aaPredicted RBP3.98□□□□□ -1.77
CCDC39-206ENST00000489868 SPATA2Q9UM82 520 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ETV7Q9Y603 341 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 AUP1Q9Y679 476 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF318Q5VUA4 2279 aa3.98□□□□□ -1.77
CCDC39-206ENST00000489868 IGLV3-10A0A075B6K4 115 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 A0A1W2PQ72 361 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 IGLON5A6NGN9 336 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF724A8MTY0 619 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 KRTAP1-4P0C5Y4 121 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ODC1P11926 461 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 GLULP15104 373 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 OR1D2P34982 312 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 SLC1A4P43007 532 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 RIDAP52758 137 aaKnown RBP3.97□□□□□ -1.77
CCDC39-206ENST00000489868 BFSP1Q12934 665 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 CYLC2Q14093 348 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 TMEM44Q2T9K0 475 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 RFTN2Q52LD8 501 aaPredicted RBP3.97□□□□□ -1.77
CCDC39-206ENST00000489868 NHSL2Q5HYW2 709 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 EMBQ6PCB8 327 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 TMEM64Q6YI46 380 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 SH2D6Q7Z4S9 175 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 BANPQ8N9N5 519 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 OR1B1Q8NGR6 318 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 C8orf46Q8TAG6 207 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 CCDC114Q96M63 670 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ERGIC2Q96RQ1 377 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 C17orf62Q9BQA9 187 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ACPTQ9BZG2 426 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF665Q9H7R5 613 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 TUFT1Q9NNX1 390 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 ZNF581Q9P0T4 197 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 SEPT10Q9P0V9 454 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 CDH7Q9ULB5 785 aa3.97□□□□□ -1.77
CCDC39-206ENST00000489868 KIAA1217Q5T5P2 1943 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 A0A1B0GTH9 108 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 FRAT2O75474 233 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-206ENST00000489868 CLN5O75503 358 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 GRAP2O75791 330 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 SLU7O95391 586 aaKnown RBP3.96□□□□□ -1.78
CCDC39-206ENST00000489868 MAGEB1P43366 347 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 AKAP17AQ02040 695 aaKnown RBP3.96□□□□□ -1.78
CCDC39-206ENST00000489868 LYPLAL1Q5VWZ2 237 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 TBC1D10CQ8IV04 446 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 ELMOD1Q8N336 334 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 ATAD1Q8NBU5 361 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 RNF149Q8NC42 400 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 OR6F1Q8NGZ6 308 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 PSMB7Q99436 277 aa3.96□□□□□ -1.78
CCDC39-206ENST00000489868 FAM212BQ9NTI7 297 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-206ENST00000489868 ARMCX3Q9UH62 379 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-206ENST00000489868 A0A087X0K7 114 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 OR5H15A6NDH6 313 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 OOEPA6NGQ2 149 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 SH3BGRLO75368 114 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 LETM1O95202 739 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-206ENST00000489868 SLC16A8O95907 504 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms