RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GABARAPL3Q9BY60 117 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC29A3Q9BZD2 475 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ARHGAP39Q9C0H5 1083 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 HAPLN2Q9GZV7 340 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SIK2Q9H0K1 926 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SMG9Q9H0W8 520 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ABCG4Q9H172 646 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ANKRA2Q9H9E1 313 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GBA2Q9HCG7 927 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 EXOSC4Q9NPD3 245 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PRMT7Q9NVM4 692 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 VNN3Q9NY84 501 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLCO1C1Q9NYB5 712 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CNOT2Q9NZN8 540 aaKnown RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PDP1Q9P0J1 537 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 IKZF3Q9UKT9 509 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 GABRQQ9UN88 632 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SSR3Q9UNL2 185 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 ENTPD4Q9Y227 616 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 RPH3AQ9Y2J0 694 aaPredicted RBP4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC6A5Q9Y345 797 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 PTGDR2Q9Y5Y4 395 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 CSADQ9Y600 493 aa4.58□□□□□ -1.68
SNRNP40-206ENST00000489853 MICAL3Q7RTP6 2002 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 MEIKINA0A087WXM9 373 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PRAMEF33A0A0G2JMD5 474 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 A0A1B0GTQ1 180 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 C17orf113A0A1B0GUU1 675 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM150BA6NC51 233 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 RRN3P2A6NIE6 340 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 C2orf74A8MZ97 194 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 MYO1GB0I1T2 1018 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 D6RAR5 112 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 M0QYV0 167 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 LGALS8O00214 317 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 DPM1O60762 260 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PRAMEF10O60809 474 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 GRAP2O75791 330 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 EIF3GO75821 320 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 CBX7O95931 251 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 VIPP01282 170 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 APOC3P02656 99 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 HLA-DOAP06340 250 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 CTSBP07858 339 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 NMBP08949 121 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TPH1P17752 444 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PTPN3P26045 913 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 APEX1P27695 318 aaKnown RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC6A1P30531 599 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SSTR2P30874 369 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 MMP12P39900 470 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 RFC3P40938 356 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 VEGFCP49767 419 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 HNMTP50135 292 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 CLCN7P51798 805 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 GPR143P51810 404 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC6A3Q01959 620 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 OLIG2Q13516 323 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PUM1Q14671 1186 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 OPCMLQ14982 345 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 MED22Q15528 200 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF528Q3MIS6 628 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ANKRD39Q53RE8 183 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 INO80DQ53TQ3 878 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PAN3Q58A45 887 aaKnown RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 C3orf38Q5JPI3 329 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 FAM109BQ6ICB4 259 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 OR7E24Q6IFN5 339 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 NAPEPLDQ6IQ20 393 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SLC25A25Q6KCM7 469 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 GDF6Q6KF10 455 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 KIAA1211LQ6NV74 962 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 NOTUMQ6P988 496 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 INTS5Q6P9B9 1019 aaKnown RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ATRAIDQ6UW56 229 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 PDZD4Q76G19 769 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SHFQ7M4L6 423 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 C11orf96Q7Z7L8 435 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ISCA2Q86U28 154 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 AMIGO3Q86WK7 504 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 DENND6AQ8IWF6 608 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 FAM126BQ8IXS8 530 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 KRT78Q8N1N4 520 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 LIX1Q8N485 282 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 CERS5Q8N5B7 392 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TBC1D19Q8N5T2 526 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM145Q8NBT3 493 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 OR11H7Q8NGC8 314 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ELP5Q8TE02 316 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SFT2D1Q8WV19 159 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM40Q8WWA1 233 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 USP7Q93009 1102 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ULK4Q96C45 1275 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ZNF837Q96EG3 531 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SCRN2Q96FV2 425 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 OTUB1Q96FW1 271 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TRMT2BQ96GJ1 504 aaKnown RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 TMEM176AQ96HP8 235 aa4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 ZBTB45Q96K62 511 aaPredicted RBP4.57□□□□□ -1.68
SNRNP40-206ENST00000489853 SFXN2Q96NB2 322 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms