RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	MAP10	Q9P2G4	905 aa		10.4	□□□□□ -0.74
GGA1-222	ENST00000489772	RNF11	Q9Y3C5	154 aa		10.4	□□□□□ -0.74
GGA1-222	ENST00000489772	MED13	Q9UHV7	2174 aa		10.4	□□□□□ -0.74
GGA1-222	ENST00000489772	PRRC2C	Q9Y520	2896 aa	Known RBP	10.4	□□□□□ -0.75
GGA1-222	ENST00000489772	IGKV3D-11	A0A0A0MRZ8	115 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SYNDIG1L	A6NDD5	238 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SMIM23	A6NLE4	172 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772		A8MT66	165 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	FOXE1	O00358	373 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RTCA	O00442	366 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CYR61	O00622	381 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	VPS4B	O75351	444 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SCEL	O95171	688 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	OTC	P00480	354 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RPS17	P08708	135 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SBK3	P0C264	359 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	KRT15	P19012	456 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ATP5F1	P24539	256 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	HSD17B3	P37058	310 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	NEK2	P51955	445 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ARFIP1	P53367	373 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SLC26A5	P58743	744 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TAS2R50	P59544	299 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RPS13	P62277	151 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	VSNL1	P62760	191 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	HERVK_113	P63132	956 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZNF33B	Q06732	778 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CUL3	Q13618	768 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZNF169	Q14929	603 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZRSR2	Q15696	482 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TTC19	Q6DKK2	380 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	OR4C11	Q6IEV9	310 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZNF793	Q6ZN11	406 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	MILR1	Q7Z6M3	343 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CUZD1	Q86UP6	607 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TDRP	Q86YL5	185 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SCUBE1	Q8IWY4	988 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RNF175	Q8N4F7	328 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SLC5A8	Q8N695	610 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	WDR20	Q8TBZ3	569 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZNF483	Q8TF39	744 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	MZB1	Q8WU39	189 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	HAS2	Q92819	552 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZNF354B	Q96LW1	612 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	NSUN5	Q96P11	429 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ERVK-6	Q9BXR3	956 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	MS4A12	Q9NXJ0	267 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	PSD3	Q9NYI0	1048 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	PLA2G3	Q9NZ20	509 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ABI3	Q9P2A4	366 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	VPS4A	Q9UN37	437 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	PCDHGA10	Q9Y5H3	936 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CSAG2	Q9Y5P2	127 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772		A0A1W2PPM1	405 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	BLACE	A4D250	179 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SAGE2P	A6NJ88	616 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	DLX3	O60479	287 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CTNS	O60931	367 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CDH16	O75309	829 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CCT5	P48643	541 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	HNRNPF	P52597	415 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CDH13	P55290	713 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	STX4	Q12846	297 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	IFT88	Q13099	833 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SLAMF1	Q13291	335 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RASA2	Q15283	850 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TERF2	Q15554	542 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	GGTA1P	Q4G0N0	100 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	PRR30	Q53SZ7	412 aa	Predicted RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ACER2	Q5QJU3	275 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	FRG2	Q64ET8	278 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	WDR93	Q6P2C0	686 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	EMB	Q6PCB8	327 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CLNK	Q7Z7G1	428 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SLC22A9	Q8IVM8	553 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CISD2	Q8N5K1	135 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	AMER2	Q8N7J2	671 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CATSPER1	Q8NEC5	780 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	C7orf57	Q8NEG2	295 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SUN3	Q8TAQ9	357 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	EPS8L3	Q8TE67	593 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TRPC4AP	Q8TEL6	797 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SNRNP40	Q96DI7	357 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	FRG2B	Q96QU4	278 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CSF3R	Q99062	836 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	SERPINI1	Q99574	410 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	RNF32	Q9H0A6	362 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ELOVL6	Q9H5J4	265 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	ZBTB26	Q9HCK0	441 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	PNO1	Q9NRX1	252 aa	Known RBP	10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	KCMF1	Q9P0J7	381 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	FBXW2	Q9UKT8	454 aa		10.39	□□□□□ -0.75
GGA1-222	ENST00000489772	TRAV17	A0A0B4J275	112 aa		10.38	□□□□□ -0.75
GGA1-222	ENST00000489772		A8MUA0	341 aa		10.38	□□□□□ -0.75
GGA1-222	ENST00000489772	PLPP1	O14494	284 aa		10.38	□□□□□ -0.75
GGA1-222	ENST00000489772	GLRA3	O75311	464 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms