RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 H3BMH7 237 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 SNPHO15079 494 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 GALR3O60755 368 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 ERN1O75460 977 aaKnown RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 KCNH1O95259 989 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 EIF2S1P05198 315 aaKnown RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 LAMP1P11279 417 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 HOXB9P17482 250 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PGM1P36871 562 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 TRPC1P48995 793 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 ARL4DP49703 201 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PSME3P61289 254 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 SKP1P63208 163 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 BTN3A2P78410 334 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 MC1RQ01726 317 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 NFYCQ13952 458 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 FAM53BQ14153 422 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 NDUFA9Q16795 377 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 LRIF1Q5T3J3 769 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 OR4F3Q6IEY1 312 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 SLC2A7Q6PXP3 512 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 DLEU7Q6UYE1 221 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 RIPOR1Q6ZS17 1223 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 TMPRSS9Q7Z410 1059 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 ZCCHC10Q8TBK6 192 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 RHBDD1Q8TEB9 315 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 MCUR1Q96AQ8 359 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PPCDCQ96CD2 204 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 ITCHQ96J02 903 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 CCDC115Q96NT0 180 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 FAIM2Q9BWQ8 316 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 CLK4Q9HAZ1 481 aaKnown RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 LYRM4Q9HD34 91 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 TEX10Q9NXF1 929 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 FTSJ1Q9UET6 329 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 BTNL2Q9UIR0 455 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 ATXN7L1Q9ULK2 861 aaPredicted RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 MRPS2Q9Y399 296 aaKnown RBP13.42□□□□□ -0.26
VPS26A-205ENST00000489656 WDR87Q6ZQQ6 2873 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 KIF26BQ2KJY2 2108 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 TRBV5-3A0A0A0MS03 114 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 IGHV5-10-1A0A0J9YXX1 117 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 C1orf226A1L170 272 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 RNASET2O00584 256 aaKnown RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 CASC3O15234 703 aaKnown RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 PROM1O43490 865 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 B3GALT2O43825 422 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 FOXD2O60548 495 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 LMNAP02545 664 aaKnown RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 CTSBP07858 339 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 PTPN6P29350 595 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 GCGRP47871 477 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SEPHS1P49903 392 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SPEM2Q0P670 501 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 TRA2AQ13595 282 aaKnown RBP eCLIP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 GRM7Q14831 915 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SPATS1Q496A3 300 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 DEFB134Q4QY38 66 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 ZNF385BQ569K4 471 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 YOD1Q5VVQ6 348 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 BNC2Q6ZN30 1099 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 DGLUCYQ7Z3D6 616 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 DHDDSQ86SQ9 333 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 PDSS2Q86YH6 399 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 NAXDQ8IW45 347 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SLITRK4Q8IW52 837 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 ATOH1Q92858 354 aaPredicted RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 C10orf90Q96M02 699 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 GFM1Q96RP9 751 aaKnown RBP13.41□□□□□ -0.26
VPS26A-205ENST00000489656 THTPAQ9BU02 230 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SPAG4Q9NPE6 437 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 MS4A12Q9NXJ0 267 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 KCMF1Q9P0J7 381 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 SH3BP4Q9P0V3 963 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 TMEM181Q9P2C4 612 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 ABCD2Q9UBJ2 740 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 DAPP1Q9UN19 280 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 CUL9Q8IWT3 2517 aa13.41□□□□□ -0.26
VPS26A-205ENST00000489656 A0A1W2PR48 441 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 D6RAR5 112 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 CBFA2T3O75081 653 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 B3GALT4O96024 378 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 SLC6A2P23975 617 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 FRKP42685 505 aaPredicted RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 SNRPNP63162 240 aaKnown RBP13.4□□□□□ -0.26
VPS26A-205ENST00000489656 TNFRSF17Q02223 184 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 PIGGQ5H8A4 983 aa13.4□□□□□ -0.26
VPS26A-205ENST00000489656 SNAP47Q5SQN1 464 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms