RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 EML6Q6ZMW3 1958 aa11.52□□□□□ -0.57
CPSF3-204ENST00000489403 A0A088AWK7 358 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 MYOCOSA0A1B0GUC4 107 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 USP27XA6NNY8 438 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 FAM166BA8MTA8 275 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 PRAMEF4O60810 478 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
CPSF3-204ENST00000489403 CLEC3AO75596 197 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
CPSF3-204ENST00000489403 CERS1P27544 350 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 SOX3P41225 446 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ARL4CP56559 192 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 NUP107P57740 925 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 BMPR2Q13873 1038 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 FASTKD3Q14CZ7 662 aaKnown RBP11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ELAVL1Q15717 326 aaKnown RBP11.51□□□□□ -0.57
CPSF3-204ENST00000489403 FBXO48Q5FWF7 155 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 PRAMEF9Q5VWM5 478 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 TRIM40Q6P9F5 258 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ABHD17CQ6PCB6 329 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 SPNS3Q6ZMD2 512 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 KRT78Q8N1N4 520 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 TMEM132CQ8N3T6 1108 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 FBXO36Q8NEA4 188 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 OR2L5Q8NG80 312 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 LILRB4Q8NHJ6 448 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 SREK1Q8WXA9 508 aaKnown RBP11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 RND1Q92730 232 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 SEC16BQ96JE7 1060 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 CAPZA3Q96KX2 299 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 SERINC2Q96SA4 455 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 MCMBPQ9BTE3 642 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 TTTY12Q9BZ98 90 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 NT5DC2Q9H857 520 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 ZDHHC11Q9H8X9 412 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 POPDC3Q9HBV1 291 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 MOCS1Q9NZB8 636 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 GPRC5BQ9NZH0 403 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 DAPP1Q9UN19 280 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 LIPGQ9Y5X9 500 aa11.51□□□□□ -0.57
CPSF3-204ENST00000489403 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 SYNDIG1LA6NDD5 238 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 ANKDD1BA6NHY2 528 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 NPIPA2E9PIF3 369 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 NPIPA3F8WFD2 350 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 G3V3Y1 287 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 ACOT7O00154 380 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 WWP2O00308 870 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 TP73O15350 636 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 TAPBPO15533 448 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 TOXO94900 526 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 WISP3O95389 354 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 IFNA16P05015 189 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 CD22P20273 847 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 MSX1P28360 303 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 HK2P52789 917 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 MTTPP55157 894 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PPIAP62937 165 aaKnown RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PAOXQ6QHF9 649 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 HSDL2Q6YN16 418 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 CCDC71Q8IV32 467 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 KLHL7Q8IXQ5 586 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PTPMT1Q8WUK0 201 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 DAZLQ92904 295 aaKnown RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 VPS39Q96JC1 886 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PITHD1Q9GZP4 211 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 DERL2Q9GZP9 239 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 PNPLA3Q9NST1 481 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 DNAJC11Q9NVH1 559 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 WWOXQ9NZC7 414 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 TNFRSF10DQ9UBN6 386 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 ZNF490Q9ULM2 529 aaPredicted RBP11.5□□□□□ -0.57
CPSF3-204ENST00000489403 CLCA3PQ9Y6N3 262 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 POLQO75417 2590 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 HIVEP1P15822 2718 aa11.5□□□□□ -0.57
CPSF3-204ENST00000489403 FOXO6A8MYZ6 492 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 E7ESA3 106 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 CLGNO14967 610 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 ZNF354AO60765 605 aaPredicted RBP11.49□□□□□ -0.57
CPSF3-204ENST00000489403 CTNSO60931 367 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 PIAS1O75925 651 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 GLSO94925 669 aaPredicted RBP11.49□□□□□ -0.57
CPSF3-204ENST00000489403 TCP1P17987 556 aaKnown RBP11.49□□□□□ -0.57
CPSF3-204ENST00000489403 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
CPSF3-204ENST00000489403 GGT5P36269 586 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 HSPA7P48741 367 aa11.49□□□□□ -0.57
CPSF3-204ENST00000489403 DR1Q01658 176 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms