RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FAM114A2Q9NRY5 505 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 HOMER3Q9NSC5 361 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 LIPT1Q9Y234 373 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 CLCA3PQ9Y6N3 262 aa10.54□□□□□ -0.72
HDAC6-233ENST00000489352 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 OVOL3O00110 214 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 KRT1P04264 644 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 CYP1A2P05177 515 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 RNH1P13489 461 aaKnown RBP10.53□□□□□ -0.72
HDAC6-233ENST00000489352 IGFBP5P24593 272 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 DPP4P27487 766 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 GCKP35557 465 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 HK2P52789 917 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 MSLNQ13421 630 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-233ENST00000489352 TFDP2Q14188 446 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 POU6F1Q14863 301 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 DPCR1Q3MIW9 517 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 CAPN13Q6MZZ7 669 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-233ENST00000489352 CLEC2AQ6UVW9 174 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 ZPLD1Q8TCW7 415 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 ABTB1Q969K4 478 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-233ENST00000489352 ANKRD9Q96BM1 317 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-233ENST00000489352 REPS1Q96D71 796 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 MARK4Q96L34 752 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 ELOVL5Q9NYP7 299 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 CHMP5Q9NZZ3 219 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 ANAPC5Q9UJX4 755 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 SLC6A5Q9Y345 797 aa10.53□□□□□ -0.72
HDAC6-233ENST00000489352 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 IGKV3D-11A0A0A0MRZ8 115 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 CCDC162PA2VCL2 907 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 GALR3O60755 368 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ACSL3O95573 720 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 SYF2O95926 243 aaKnown RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 PLAUP00749 431 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 IGHV4-39P01824 125 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 SERPIND1P05546 499 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ERGP11308 486 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 LOXP28300 417 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 FOXN2P32314 431 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 PCYT1AP49585 367 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 LOXL1Q08397 574 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 FASTKD1Q53R41 847 aaKnown RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ANKRD34AQ69YU3 496 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 PLXDC2Q6UX71 529 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 CCDC50Q8IVM0 306 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 TMEM132CQ8N3T6 1108 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 CNEP1R1Q8N9A8 125 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 FBXW5Q969U6 566 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 TM4SF19Q96DZ7 209 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 WDYHV1Q96HA8 205 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 PPP1R2P1Q96PQ5 205 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ERGIC2Q96RQ1 377 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 DOHHQ9BU89 302 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ALG2Q9H553 416 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 CNIH4Q9P003 139 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 PPIEQ9UNP9 301 aaKnown RBP10.52□□□□□ -0.73
HDAC6-233ENST00000489352 MAPRE3Q9UPY8 281 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF148Q9UQR1 794 aa10.52□□□□□ -0.73
HDAC6-233ENST00000489352 ALPK2Q86TB3 2170 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 A0A1W2PP18 115 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 LGALS16A8MUM7 142 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 H0Y3Z8 333 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 IFNA16P05015 189 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 PYGBP11216 843 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 SKILP12757 684 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ALOX12P18054 663 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 PSMB4P28070 264 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 NUDT6P53370 316 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 EIF3BP55884 814 aaKnown RBP10.51□□□□□ -0.73
HDAC6-233ENST00000489352 DSCR9P59020 149 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 FAPQ12884 760 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 SLC13A2Q13183 592 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 SPARCL1Q14515 664 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 NFKBIBQ15653 356 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 DNM1P46Q6ZS02 220 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 FAM13CQ8NE31 585 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 DAZLQ92904 295 aaKnown RBP10.51□□□□□ -0.73
HDAC6-233ENST00000489352 WNT2BQ93097 391 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 CAVIN3Q969G5 261 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 PGM2Q96G03 612 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 PLPPR2Q96GM1 343 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF597Q96LX8 424 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 UGT2B28Q9BY64 529 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 KLHL4Q9C0H6 718 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ZNF696Q9H7X3 374 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ARNT2Q9HBZ2 717 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 ADAP2Q9NPF8 381 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 MMACHCQ9Y4U1 282 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 VWFP04275 2813 aa10.51□□□□□ -0.73
HDAC6-233ENST00000489352 LOC100289279A0A1B0GTE1 492 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 LRRC14BA6NHZ5 514 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 LRRC3CA6NJW4 275 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 HACD1B0YJ81 288 aa10.5□□□□□ -0.73
HDAC6-233ENST00000489352 E7ENX8 843 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms