RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SEC16BQ96JE7 1060 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 PAFAH2Q99487 392 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 MAPKAP1Q9BPZ7 522 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 NPLQ9BXD5 320 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-206ENST00000489142 OR51B5Q9H339 312 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 LIN28AQ9H9Z2 209 aaKnown RBP13.1□□□□□ -0.31
VTI1A-206ENST00000489142 DAPP1Q9UN19 280 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 CYR61O00622 381 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 LDB3O75112 727 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 NEURL1O76050 574 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 UNC5CO95185 931 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 DDAH2O95865 285 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 INHBAP08476 426 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 EPB42P16452 691 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 CASP2P42575 452 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 PIK3CGP48736 1102 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 MLF1P58340 268 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 TGM3Q08188 693 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-206ENST00000489142 ACAP2Q15057 778 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 C4orf17Q53FE4 359 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 TECRLQ5HYJ1 363 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 DOPEY1Q5JWR5 2465 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 GRHL2Q6ISB3 625 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 KLC3Q6P597 504 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-206ENST00000489142 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 LAS2Q8IYD9 372 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 RHEBL1Q8TAI7 183 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 SLC44A1Q8WWI5 657 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 NCLNQ969V3 563 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 MTERF1Q99551 399 aaKnown RBP13.09□□□□□ -0.31
VTI1A-206ENST00000489142 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 SH3BGRL2Q9UJC5 107 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF223Q9UK11 482 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-206ENST00000489142 FBXW2Q9UKT8 454 aa13.09□□□□□ -0.31
VTI1A-206ENST00000489142 WIPF3A6NGB9 483 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 CLDN4O14493 209 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ZNHIT1O43257 154 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 PRKNO60260 465 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 PRKRAO75569 313 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 SLC25A12O75746 678 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 CRYABP02511 175 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 IFNA16P05015 189 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 MYBL2P10244 700 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 CD46P15529 392 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ATP5A1P25705 553 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 HPDP32754 393 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 SSR2P43308 183 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ALDH18A1P54886 795 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 HSD17B7P56937 341 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 GTF2H2Q13888 395 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 E2F2Q14209 437 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 MAPKAPK3Q16644 382 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 FAM219BQ5XKK7 198 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 GTF2H2CQ6P1K8 395 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 GOLGA7Q7Z5G4 137 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF227Q86WZ6 799 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF595Q8IYB9 648 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ZNF321PQ8N8H1 164 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ACOT4Q8N9L9 421 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 B3GNT7Q8NFL0 401 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 HUS1BQ8NHY5 278 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 DCAKDQ8WVC6 231 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 PHF21BQ96EK2 531 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 SCYL1Q96KG9 808 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 CDK15Q96Q40 435 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 ACTR8Q9H981 624 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 KCMF1Q9P0J7 381 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 SEC14L3Q9UDX4 400 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.32
VTI1A-206ENST00000489142 IKBKGQ9Y6K9 419 aa13.08□□□□□ -0.32
VTI1A-206ENST00000489142 MYO7BQ6PIF6 2116 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 KLK8O60259 260 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 ZG16O60844 167 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 SP1P08047 785 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 HIST1H1TP22492 207 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 ARL1P40616 181 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 MAGEA12P43365 314 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 CLCN2P51788 898 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 NEK2P51955 445 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 RAP1GDS1P52306 607 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 RPS13P62277 151 aaKnown RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 AP5B1Q2VPB7 878 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 KHDRBS2Q5VWX1 349 aaKnown RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 CEP128Q6ZU80 1094 aa13.07□□□□□ -0.32
VTI1A-206ENST00000489142 RPS27LQ71UM5 84 aaKnown RBP13.07□□□□□ -0.32
VTI1A-206ENST00000489142 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms