RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 MTRF1LQ9UGC7 380 aaKnown RBP21.58■■□□□ 1.05
CUL4A-209ENST00000488558 DIDO1Q9BTC0 2240 aaKnown RBP21.57■■□□□ 1.04
CUL4A-209ENST00000488558 HMX2A2RU54 273 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 TGFBR3LH3BV60 316 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 NME2P1O60361 137 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 SLC25A12O75746 678 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 URI1O94763 535 aaPredicted RBP21.57■■□□□ 1.04
CUL4A-209ENST00000488558 SCELO95171 688 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 C2P06681 752 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 EPB42P16452 691 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 NME2P22392 152 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 HNRNPFP52597 415 aaKnown RBP21.57■■□□□ 1.04
CUL4A-209ENST00000488558 SLC13A2Q13183 592 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 BMPR2Q13873 1038 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 NAA30Q147X3 362 aaPredicted RBP21.57■■□□□ 1.04
CUL4A-209ENST00000488558 ACAP2Q15057 778 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 MROH9Q5TGP6 573 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 ZNF468Q5VIY5 522 aaPredicted RBP21.57■■□□□ 1.04
CUL4A-209ENST00000488558 GRHL2Q6ISB3 625 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 FJX1Q86VR8 437 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 FAM47BQ8NA70 645 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 KCTD4Q8WVF5 259 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 F2RL3Q96RI0 385 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 TSPYL1Q9H0U9 437 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 NINJ2Q9NZG7 142 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 ADGRE2Q9UHX3 823 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 TSC22D4Q9Y3Q8 395 aa21.57■■□□□ 1.04
CUL4A-209ENST00000488558 TRBV11-1A0A0K0K1C0 115 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 A8MUA0 341 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 CTNSO60931 367 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 SERPINB8P50452 374 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 HLCSP50747 726 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 GPR143P51810 404 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 SETDB1Q15047 1291 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 ELAVL1Q15717 326 aaKnown RBP21.56■■□□□ 1.04
CUL4A-209ENST00000488558 KRTCAP3Q53RY4 240 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 GALNTL5Q7Z4T8 443 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 MMGT1Q8N4V1 131 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 C7orf57Q8NEG2 295 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 GPR137Q96N19 417 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 CSF3RQ99062 836 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 PNO1Q9NRX1 252 aaKnown RBP21.56■■□□□ 1.04
CUL4A-209ENST00000488558 KCMF1Q9P0J7 381 aa21.56■■□□□ 1.04
CUL4A-209ENST00000488558 A0A096LPK6 155 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 KLK8O60259 260 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 ZG16O60844 167 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 KLHL2O95198 593 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 CA7P43166 264 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 IRF9Q00978 393 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 ALDH6A1Q02252 535 aaKnown RBP21.55■■□□□ 1.04
CUL4A-209ENST00000488558 METTL2BQ6P1Q9 378 aaKnown RBP21.55■■□□□ 1.04
CUL4A-209ENST00000488558 MTFR2Q6P444 385 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 CHSY3Q70JA7 882 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 UBE3DQ7Z6J8 389 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 ZNF227Q86WZ6 799 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 TMEM132CQ8N3T6 1108 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 OR7G3Q8NG95 312 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 CMTM7Q96FZ5 175 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 ZNF223Q9UK11 482 aaPredicted RBP21.55■■□□□ 1.04
CUL4A-209ENST00000488558 SPACA6W5XKT8 324 aa21.55■■□□□ 1.04
CUL4A-209ENST00000488558 HIST1H1TP22492 207 aaPredicted RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 ATP5A1P25705 553 aaKnown RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 PPP2R1BP30154 601 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 DCTP40126 519 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 ST13P50502 369 aaKnown RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 ALDH18A1P54886 795 aaKnown RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 KHDRBS2Q5VWX1 349 aaKnown RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 KLC3Q6P597 504 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 ZNF793Q6ZN11 406 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 SIAH3Q8IW03 269 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 ACOT4Q8N9L9 421 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 NCLNQ969V3 563 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 TMEM125Q96AQ2 219 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 CCDC77Q9BR77 488 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 SUCOQ9UBS9 1254 aaKnown RBP21.54■■□□□ 1.04
CUL4A-209ENST00000488558 TEX15Q9BXT5 2789 aa21.54■■□□□ 1.04
CUL4A-209ENST00000488558 TRGV8A0A0C4DH27 118 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 UGDHO60701 494 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 ALDOAP04075 364 aaKnown RBP21.53■■□□□ 1.04
CUL4A-209ENST00000488558 PCNAP12004 261 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 GFAPP14136 432 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 COL8A1P27658 744 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 TYK2P29597 1187 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 PIK3CBP42338 1070 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 ARFIP1P53367 373 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 SERTAD2Q14140 314 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 PCBP2Q15366 365 aaKnown RBP eCLIP21.53■■□□□ 1.042e-6■□□□□ 9
CUL4A-209ENST00000488558 UAP1Q16222 522 aaPredicted RBP21.53■■□□□ 1.04
CUL4A-209ENST00000488558 MAPKAPK3Q16644 382 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 AP5B1Q2VPB7 878 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 LIPJQ5W064 366 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 TEX9Q8N6V9 391 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 POGLUT1Q8NBL1 392 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 MNS1Q8NEH6 495 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 OR14A16Q8NHC5 309 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 DAZLQ92904 295 aaKnown RBP21.53■■□□□ 1.04
CUL4A-209ENST00000488558 ISL2Q96A47 359 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 MRRFQ96E11 262 aaKnown RBP21.53■■□□□ 1.04
CUL4A-209ENST00000488558 GPR78Q96P69 363 aa21.53■■□□□ 1.04
CUL4A-209ENST00000488558 VTI1BQ9UEU0 232 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms