RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PIK3CGP48736 1102 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 HSD17B7P56937 341 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 GTF2H2Q13888 395 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 PCBP2Q15366 365 aaKnown RBP eCLIP16.6■□□□□ 0.253e-8■■■□□ 18.9
ITGB1-215ENST00000488494 OR1C1Q15619 314 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TMEM35AQ53FP2 167 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF766Q5HY98 468 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 GTF2H2CQ6P1K8 395 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 IFT20Q8IY31 132 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF595Q8IYB9 648 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 LGI4Q8N135 537 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 NFAM1Q8NET5 270 aaPredicted RBP16.6■□□□□ 0.25
ITGB1-215ENST00000488494 HUS1BQ8NHY5 278 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 SCYL1Q96KG9 808 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 SIGLEC12Q96PQ1 595 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 PSMG3-AS1Q96PY0 264 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 RHOXF2Q9BQY4 288 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TBCDQ9BTW9 1192 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 OR51B5Q9H339 312 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 LYRM4Q9HD34 91 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 DMRT3Q9NQL9 472 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 PNO1Q9NRX1 252 aaKnown RBP16.6■□□□□ 0.25
ITGB1-215ENST00000488494 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TNPO3Q9Y5L0 923 aaKnown RBP16.6■□□□□ 0.25
ITGB1-215ENST00000488494 ESPL1Q14674 2120 aa16.6■□□□□ 0.25
ITGB1-215ENST00000488494 TRBV11-1A0A0K0K1C0 115 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 RASAL1O95294 804 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ABHD2P08910 425 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 MYBL2P10244 700 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 HIST1H1TP22492 207 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ATP5A1P25705 553 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 EEF1DP29692 281 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 CD96P40200 585 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ARL1P40616 181 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 PMP22Q01453 160 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 OC90Q02509 493 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 RCN2Q14257 317 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 TERF2Q15554 542 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 TSNAXIP1Q2TAA8 658 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 KHDRBS2Q5VWX1 349 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ACOT4Q8N9L9 421 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 LRRN4CLQ8ND94 238 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 MDS2Q8NDY4 140 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 SRFBP1Q8NEF9 429 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 NR4A3Q92570 626 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 CMTM7Q96FZ5 175 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 MTERF1Q99551 399 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 SORBS1Q9BX66 1292 aaKnown RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 CDCP1Q9H5V8 836 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 KLHL1Q9NR64 748 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 ERRFI1Q9UJM3 462 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-215ENST00000488494 HIVEP3Q5T1R4 2406 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 MAST4O15021 2626 aa16.59■□□□□ 0.25
ITGB1-215ENST00000488494 SCELO95171 688 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 RBP1P09455 135 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 TPP2P29144 1249 aaPredicted RBP16.58■□□□□ 0.24
ITGB1-215ENST00000488494 PIK3CBP42338 1070 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 TDGF1P3P51864 188 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 RAP1GDS1P52306 607 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 PHEXP78562 749 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 SRSF11Q05519 484 aaKnown RBP16.58■□□□□ 0.24
ITGB1-215ENST00000488494 LIPJQ5W064 366 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 CHSY3Q70JA7 882 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 TRMT10CQ7L0Y3 403 aaKnown RBP16.58■□□□□ 0.24
ITGB1-215ENST00000488494 RPS19BP1Q86WX3 136 aaKnown RBP16.58■□□□□ 0.24
ITGB1-215ENST00000488494 GSPT2Q8IYD1 628 aaKnown RBP16.58■□□□□ 0.24
ITGB1-215ENST00000488494 APCDD1LQ8NCL9 501 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 B3GNT7Q8NFL0 401 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 PHF21BQ96EK2 531 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 C5orf34Q96MH7 638 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 MAPKAP1Q9BPZ7 522 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 IPPKQ9H8X2 491 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 ADAP2Q9NPF8 381 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 KCMF1Q9P0J7 381 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 OSGIN2Q9Y236 505 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 SLC5A6Q9Y289 635 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 PCDHGA11Q9Y5H2 935 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 DOPEY1Q5JWR5 2465 aa16.58■□□□□ 0.24
ITGB1-215ENST00000488494 MYOCOSA0A1B0GUC4 107 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 CYSRT1A8MQ03 144 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 RIPK2O43353 540 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 UGDHO60701 494 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 SMIM24O75264 130 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 CRYABP02511 175 aaKnown RBP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 IFNA16P05015 189 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 FAM153BP0C7A2 387 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 GP1BBP13224 206 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 MLF1P58340 268 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 CPSF6Q16630 551 aaKnown RBP eCLIP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 AP5B1Q2VPB7 878 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 FAM153CQ494X1 144 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF468Q5VIY5 522 aaPredicted RBP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 SPINK14Q6IE38 97 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 METTL2BQ6P1Q9 378 aaKnown RBP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 NCLNQ969V3 563 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 REPS1Q96D71 796 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 CDK15Q96Q40 435 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms