RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 TRIM45Q9H8W5 580 aaPredicted RBP13.58□□□□□ -0.24
COL16A1-214ENST00000488128 NMNAT1Q9HAN9 279 aaPredicted RBP13.58□□□□□ -0.24
COL16A1-214ENST00000488128 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
COL16A1-214ENST00000488128 TEX28O15482 410 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ITGALP20701 1170 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ALAS2P22557 587 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 RPS3P23396 243 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 AOAHP28039 575 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 MAPK1P28482 360 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 RPS5P46782 204 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ATN1P54259 1190 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HBA1P69905 142 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SRSF11Q05519 484 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 MTAPQ13126 283 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 VEZF1Q14119 521 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 INSL4Q14641 139 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 XKR6Q5GH73 641 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SHFQ7M4L6 423 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HMGN2P46Q86SG4 172 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SPERTQ8NA61 448 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 OR4C15Q8NGM1 316 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 CIDECQ96AQ7 238 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 REPS1Q96D71 796 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 MED8Q96G25 268 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TRBV4-1A0A0J9YWV2 114 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 A0A1B0GVC2 190 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 FAM240BA0A1B0GVZ2 78 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 A6NIN4 97 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TDRD15B5MCY1 1934 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ANXA4P09525 319 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TNNI3P19429 210 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 CD9P21926 228 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 CRISP1P54107 249 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 RPS26P62854 115 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 LRRC32Q14392 662 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 LAMTOR1Q6IAA8 161 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 CREB3L4Q8TEY5 395 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ZBED6CLQ96FA7 236 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 FUBP3Q96I24 572 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 GON7Q9BXV9 100 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 VPS29Q9UBQ0 182 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 CD84Q9UIB8 345 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SPIN1Q9Y657 262 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 VCANP13611 3396 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 GLYATL1P3A0A0U1RQE8 302 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 C2orf78A6NCI8 922 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 H7C0S8 307 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SMAD6O43541 496 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 UBL4AP11441 157 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ACRV1P26436 265 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ACLYP53396 1101 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 ASAH1Q13510 395 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SCARB2Q14108 478 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TJAP1Q5JTD0 557 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 SERPINA13PQ6UXR4 307 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 PHC2Q8IXK0 858 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 Q8N402 240 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 C19orf18Q8NEA5 215 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 UPRTQ96BW1 309 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 PLEKHB1Q9UF11 243 aaPredicted RBP13.57□□□□□ -0.24
COL16A1-214ENST00000488128 TMCC3Q9ULS5 477 aa13.57□□□□□ -0.24
COL16A1-214ENST00000488128 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 TLR4O00206 839 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 PLOD3O60568 738 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 C6orf47O95873 294 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 PTPN5P54829 565 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■■□□ 17.8
COL16A1-214ENST00000488128 FCHO2Q0JRZ9 810 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 WSCD2Q2TBF2 565 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 ZNF385BQ569K4 471 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 TOR2AQ5JU69 321 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 ATAT1Q5SQI0 421 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 NCEH1Q6PIU2 408 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 CERS6Q6ZMG9 384 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 TAS1R1Q7RTX1 841 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 DHRS9Q9BPW9 319 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 CDCP1Q9H5V8 836 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 ATP13A2Q9NQ11 1180 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 STUB1Q9UNE7 303 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 MGAT4DA6NG13 374 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 LEUTXA8MZ59 168 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 CDK2AP1O14519 115 aa13.56□□□□□ -0.24
COL16A1-214ENST00000488128 VNN2O95498 520 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms