RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ACADVLP49748 655 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ELF3P78545 371 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CKAP4Q07065 602 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 RASGEF1BQ0VAM2 473 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 BTG3Q14201 252 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM187Q14656 261 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 LASP1Q14847 261 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC6Q16204 474 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 RBBP7Q16576 425 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 MEP1BQ16820 701 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF674Q2M3X9 581 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 TYSND1Q2T9J0 566 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CTU2Q2VPK5 515 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 PARP10Q53GL7 1025 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ZRANB3Q5FWF4 1079 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 XKR6Q5GH73 641 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CASC4Q6P4E1 433 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 EMBQ6PCB8 327 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC121Q6ZUS5 278 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 NLRP14Q86W24 1093 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 HOGA1Q86XE5 327 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 SAMD9LQ8IVG5 1584 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 MREGQ8N565 214 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 EIF1ADQ8N9N8 165 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 STKLD1Q8NE28 680 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 OR7A2PQ8NGA2 310 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 OR5AP2Q8NGF4 316 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 AENQ8WTP8 325 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 GRK7Q8WTQ7 553 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 MAIP1Q8WWC4 291 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 METTL21AQ8WXB1 218 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 AZIN2Q96A70 460 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC51Q96ER9 411 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 C4orf45Q96LM5 186 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 AK8Q96MA6 479 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 NECTIN4Q96NY8 510 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 PANX2Q96RD6 677 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 RUFY1Q96T51 708 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ASCL2Q99929 193 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 UPF3BQ9BZI7 483 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 DNAI2Q9GZS0 605 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP13A3Q9H7F0 1226 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 KCNMB3Q9NPA1 279 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 PLCXD1Q9NUJ7 323 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 HYPKQ9NX55 129 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 TUBGCP4Q9UGJ1 667 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ARMCX3Q9UH62 379 aaPredicted RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 TBK1Q9UHD2 729 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 PAIP2BQ9ULR5 123 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 RPL26L1Q9UNX3 145 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 LIPT1Q9Y234 373 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 GPATCH8Q9UKJ3 1502 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 KNDC1Q76NI1 1749 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CRYBG1Q9Y4K1 1723 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CDC42BPBQ9Y5S2 1711 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 MAST1Q9Y2H9 1570 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CD109Q6YHK3 1445 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKARQ7Z5J8 1434 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 FAM86B1E9PN63 330 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 FCGR3BO75015 233 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 SMIM24O75264 130 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF821O75541 412 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 FAM86B2P0C5J1 330 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 TROVE2P10155 538 aaKnown RBP eCLIP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PRKAR1AP10644 381 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC2A2P11168 524 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PDHBP11177 359 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 TCF4P15884 667 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF26P17031 533 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CEBPBP17676 345 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 GJB2P29033 226 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 TIA1P31483 386 aaKnown RBP eCLIP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CDX1P47902 265 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC6A12P48065 614 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 SERPINB8P50452 374 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 DNA2P51530 1060 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 MYL7Q01449 175 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 YWHAHQ04917 246 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CACNG1Q06432 222 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 NFE2L1Q14494 772 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ITIH4Q14624 930 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 BCL2A1Q16548 175 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKRD20A4Q4UJ75 823 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKRD20A2Q5SQ80 823 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKRD20A1Q5TYW2 823 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ANKRD20A3Q5VUR7 823 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 GSG1LQ6UXU4 331 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 LINC00696Q6ZRV3 163 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 C3orf62Q6ZUJ4 267 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 BTN2A1Q7KYR7 527 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 RUFY3Q7L099 469 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CATSPER4Q7RTX7 472 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PTAR1Q7Z6K3 402 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 HOOK3Q86VS8 718 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ERICH1Q86X53 443 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC65Q8IXS2 484 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC63Q8NA47 563 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 NHLRC2Q8NBF2 726 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms