RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 HSD3B2P26439 372 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 ARRB2P32121 409 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 TSFMP43897 325 aaKnown RBP18.43■□□□□ 0.54
SEC22A-208ENST00000487572 WDR4P57081 412 aaKnown RBP18.43■□□□□ 0.54
SEC22A-208ENST00000487572 BTG2P78543 158 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 HMGCS1Q01581 520 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 RHAGQ02094 409 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 TUBB8Q3ZCM7 444 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 CES4AQ5XG92 561 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 CYP20A1Q6UW02 462 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 KIRREL2Q6UWL6 708 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 LANCL3Q6ZV70 420 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 EFCAB3Q8N7B9 438 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 APOBEC4Q8WW27 367 aaKnown RBP18.43■□□□□ 0.54
SEC22A-208ENST00000487572 TSLPQ969D9 159 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 ARHGAP9Q9BRR9 750 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 ACPTQ9BZG2 426 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 LYRM4Q9HD34 91 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 ZNF446Q9NWS9 450 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 NMRK1Q9NWW6 199 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 FBXL4Q9UKA2 621 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 PCSK5Q92824 1860 aa18.43■□□□□ 0.54
SEC22A-208ENST00000487572 ITPR1Q14643 2758 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 KMT2BQ9UMN6 2715 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 PRMT3O60678 531 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 LYPLA1O75608 230 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 DNAJB5O75953 348 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 HSPA4LO95757 839 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 KLK1P06870 262 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 MAOAP21397 527 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 CPN2P22792 545 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 SERPINB5P36952 375 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 HNRNPFP52597 415 aaKnown RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 ARFIP1P53367 373 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 NSDHLQ15738 373 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 IMPG1Q17R60 797 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 SH2D4BQ5SQS7 431 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 METTL4Q8N3J2 472 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 ZCCHC7Q8N3Z6 543 aaKnown RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 C1orf52Q8N6N3 182 aaKnown RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 GBP7Q8N8V2 638 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 TMEM52Q8NDY8 209 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 OR11G2Q8NGC1 345 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 OR6Y1Q8NGX8 325 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 ADAMTS18Q8TE60 1221 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 PTCHD1Q96NR3 888 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 ING2Q9H160 280 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 ACBD3Q9H3P7 528 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 DDX31Q9H8H2 851 aaKnown RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 KCMF1Q9P0J7 381 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 VPS29Q9UBQ0 182 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 MRPS33Q9Y291 106 aaKnown RBP18.42■□□□□ 0.54
SEC22A-208ENST00000487572 PTGDR2Q9Y5Y4 395 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 SPACA6W5XKT8 324 aa18.42■□□□□ 0.54
SEC22A-208ENST00000487572 A0A0A6YYD5 115 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 IGHV3-20A0A0C4DH32 117 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 ARHGAP10A1A4S6 786 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 HMGB1P1B2RPK0 211 aaPredicted RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 ITM2AO43736 263 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TMPRSS11DO60235 418 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 SLC18A1P54219 525 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 RRADP55042 308 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 HNRNPH2P55795 449 aaKnown RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 BTKQ06187 659 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 GALNT1Q10472 559 aaPredicted RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TBL3Q12788 808 aaKnown RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 SPDYAQ5MJ70 313 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 KANK2Q63ZY3 851 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 ATG14Q6ZNE5 492 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 PAGE2Q7Z2X7 111 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 COMMD6Q7Z4G1 85 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 CLNKQ7Z7G1 428 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TTC9Q92623 222 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 NACC2Q96BF6 587 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 VPS50Q96JG6 964 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 FER1L6-AS2Q96M78 137 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TRIM55Q9BYV6 548 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 ZNF395Q9H8N7 513 aaPredicted RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 PRTFDC1Q9NRG1 225 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 LYARQ9NX58 379 aaKnown RBP18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TRAF6Q9Y4K3 522 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 CACNA1BQ00975 2339 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 NUP210LQ5VU65 1888 aa18.41■□□□□ 0.54
SEC22A-208ENST00000487572 TMEM114B3SHH9 223 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 CYR61O00622 381 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 CHEK2O96017 543 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 FAM58BPP0C7Q3 252 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 CCL11P51671 97 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 POLE2P56282 527 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 ABCE1P61221 599 aaKnown RBP18.4■□□□□ 0.54
SEC22A-208ENST00000487572 ZNF33BQ06732 778 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 SLC13A2Q13183 592 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 STX3Q13277 289 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 LINC00303Q3SY05 128 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 DCAF10Q5QP82 559 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 CCNYL2Q5T2Q4 361 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 TMEM205Q6UW68 189 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 QSOX2Q6ZRP7 698 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 MED25Q71SY5 747 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 ANKRD37Q7Z713 158 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms