RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PHF11Q9UIL8 331 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 UBR5O95071 2799 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 OR2W5A6NFC9 320 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 PYCARD-AS1I3L0S3 204 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 PLPP1O14494 284 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 CTNSO60931 367 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 GLRA3O75311 464 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 WDPCPO95876 746 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 OTCP00480 354 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 TGFB1P01137 390 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 TAC1P20366 129 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 MAOAP21397 527 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 SSR2P43308 183 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 CCNG1P51959 295 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 RAP1GDS1P52306 607 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 HERVK_113P63132 956 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 BTG2P78543 158 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 TNFRSF17Q02223 184 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ZNF33BQ06732 778 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ZRSR2Q15696 482 aaKnown RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 AP5B1Q2VPB7 878 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 COLEC12Q5KU26 742 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ACER2Q5QJU3 275 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 OR4C11Q6IEV9 310 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 MRM1Q6IN84 353 aaKnown RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 SLC22A9Q8IVM8 553 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 RIBC1Q8N443 379 aaPredicted RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 ACOT4Q8N9L9 421 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 APCDD1LQ8NCL9 501 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ST6GALNAC3Q8NDV1 305 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 OR52B6Q8NGF0 335 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 RGMAQ96B86 450 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 CCDC126Q96EE4 140 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 PHF21BQ96EK2 531 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 VMP1Q96GC9 406 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 CSF3RQ99062 836 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 SERPINI1Q99574 410 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ERVK-6Q9BXR3 956 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ZNF717Q9BY31 904 aaPredicted RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 NOL11Q9H8H0 719 aaKnown RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 ANKZF1Q9H8Y5 726 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 LYARQ9NX58 379 aaKnown RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 TRPS1Q9UHF7 1281 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 ADAM29Q9UKF5 820 aa9.61□□□□□ -0.87
RNF220-215ENST00000487332 COPG1Q9Y678 874 aaKnown RBP9.61□□□□□ -0.87
RNF220-215ENST00000487332 A0A0A6YYD5 115 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 A0A0G2JN53 185 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 LRRC14BA6NHZ5 514 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 FAM227AF5H4B4 570 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 H3BQF6 201 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 TGFBR3LH3BV60 316 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 PRAMEF2O60811 474 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 CDH16O75309 829 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 UQCRHP07919 91 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 NUDT17P0C025 328 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 EDN3P14138 238 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 ATP5F1P24539 256 aaPredicted RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 TRHRP34981 398 aaPredicted RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 BUD31P41223 144 aaPredicted RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 CLCN2P51788 898 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 GPR143P51810 404 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 HNRNPFP52597 415 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 SLC13A2Q13183 592 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 CPSF6Q16630 551 aaKnown RBP eCLIP9.6□□□□□ -0.87
RNF220-215ENST00000487332 ZNF678Q5SXM1 525 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 FRG2Q64ET8 278 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 ZNF324BQ6AW86 544 aaPredicted RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 FAM180AQ6UWF9 173 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 NUDT13Q86X67 352 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 MYLK4Q86YV6 388 aaPredicted RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 CRLF3Q8IUI8 442 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 GSPT2Q8IYD1 628 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 BEST3Q8N1M1 668 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 TMEM132CQ8N3T6 1108 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 FAM26EQ8N5C1 309 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 HORMAD2Q8N7B1 307 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 FAM47BQ8NA70 645 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 MORN4Q8NDC4 146 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 MDS2Q8NDY4 140 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 TMEM52Q8NDY8 209 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 OR8K3Q8NH51 312 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 OR14A16Q8NHC5 309 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 SUN3Q8TAQ9 357 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 RDH11Q8TC12 318 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 DAZLQ92904 295 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 L3HYPDHQ96EM0 354 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 SCMH1Q96GD3 660 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 CNDP1Q96KN2 507 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 FRG2BQ96QU4 278 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 ZNF382Q96SR6 550 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 NPAS2Q99743 824 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 SLX1AQ9BQ83 275 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 PELOQ9BRX2 385 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
RNF220-215ENST00000487332 DDX31Q9H8H2 851 aaKnown RBP9.6□□□□□ -0.87
RNF220-215ENST00000487332 BRF2Q9HAW0 419 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms