RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 HOOK3Q86VS8 718 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 SERPINA9Q86WD7 417 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 CPOQ8IVL8 374 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 NAXDQ8IW45 347 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 Q8N1X5 172 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 MMGT1Q8N4V1 131 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 RASGEF1AQ8N9B8 481 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 NOA1Q8NC60 698 aaKnown RBP6□□□□□ -1.45
RTFDC1-209ENST00000487211 DDHD1Q8NEL9 900 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 OR4L1Q8NH43 312 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 GDAP1Q8TB36 358 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 GLMPQ8WWB7 406 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 SGF29Q96ES7 293 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 HS6ST2Q96MM7 605 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 WDR83Q9BRX9 315 aaKnown RBP6□□□□□ -1.45
RTFDC1-209ENST00000487211 TUBB2BQ9BVA1 445 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 DPH5Q9H2P9 285 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 CDCP1Q9H5V8 836 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 PLAC1Q9HBJ0 212 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 SMOXQ9NWM0 555 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 TRNAU1APQ9NX07 287 aaKnown RBP6□□□□□ -1.45
RTFDC1-209ENST00000487211 VPS18Q9P253 973 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 SPASTQ9UBP0 616 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 ANAPC5Q9UJX4 755 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 PRSS21Q9Y6M0 314 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 CSNK1G3Q9Y6M4 447 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 U3KQA8 63 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 TMEM131Q92545 1883 aa6□□□□□ -1.45
RTFDC1-209ENST00000487211 UTP20O75691 2785 aaKnown RBP6□□□□□ -1.45
RTFDC1-209ENST00000487211 APC2O95996 2303 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 IGLV3-16A0A075B6K0 115 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 FAM237BA0A1B0GVD1 139 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 SPAARA0A1B0GVQ0 90 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 MAGEB16A2A368 324 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 NEMP2A6NFY4 417 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 OR2AG2A6NM03 316 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 GOLGA8KD6RF30 607 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 GOLGA8TH3BQL2 631 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 AP3B1O00203 1094 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CASC3O15234 703 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 YKT6O15498 198 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 FLRT2O43155 660 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 VEGFDO43915 354 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ZNF500O60304 480 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 OR1I1O60431 355 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 POP7O75817 140 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 VAPBO95292 243 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 LDOC1O95751 146 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 EML2O95834 649 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 HNRNPCP07910 306 aaKnown RBP eCLIP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CEACAM1P13688 526 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 APEHP13798 732 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ATP1B2P14415 290 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 DEKP35659 375 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 DRG2P55039 364 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CACNG1Q06432 222 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CKAP4Q07065 602 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 DNAJC3Q13217 504 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 LAMB3Q13751 1172 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 MORF4L2Q15014 288 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ELOCQ15369 112 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 TRIP6Q15654 476 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ERCC6LQ2NKX8 1250 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 GPR33Q49SQ1 333 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 LDLRAP1Q5SW96 308 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CASC4Q6P4E1 433 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 DET1Q7L5Y6 550 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 BCDIN3DQ7Z5W3 292 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 TAF8Q7Z7C8 310 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CLDN19Q8N6F1 224 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 SIMC1Q8NDZ2 872 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 PPHLN1Q8NEY8 458 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 OR4C6Q8NH72 309 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 PEX13Q92968 403 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ART4Q93070 314 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 TRMT61AQ96FX7 289 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 SNF8Q96H20 258 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CNDP2Q96KP4 475 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 APOLD1Q96LR9 279 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 OR2M4Q96R27 311 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 EBNA1BP2Q99848 306 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ELOVL1Q9BW60 279 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CARD6Q9BX69 1037 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 RMI1Q9H9A7 625 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 MRM3Q9HC36 420 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 XAB2Q9HCS7 855 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 NLGN3Q9NZ94 848 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 IL1RAPL1Q9NZN1 696 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 TAAR2Q9P1P5 351 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 MARCH4Q9P2E8 410 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 PDP2Q9P2J9 529 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 TBC1D29Q9UFV1 150 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 CRLS1Q9UJA2 301 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 KCNK6Q9Y257 313 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ENTPD2Q9Y5L3 495 aa5.99□□□□□ -1.45
RTFDC1-209ENST00000487211 ACACAQ13085 2346 aa5.98□□□□□ -1.45
RTFDC1-209ENST00000487211 CTAGE15A4D2H0 777 aa5.98□□□□□ -1.45
RTFDC1-209ENST00000487211 MBD3L5A6NJ08 208 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms