RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ARMC8Q8IUR7 673 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TDHQ8IZJ6 230 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 LGI4Q8N135 537 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 SMYD1Q8NB12 490 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ST13P5Q8NFI4 369 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 DNASE1L2Q92874 299 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ABTB1Q969K4 478 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 MS4A8Q9BY19 250 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 CXorf36Q9H7Y0 433 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 YBX2Q9Y2T7 364 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 WBP11Q9Y2W2 641 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 DNMT3AQ9Y6K1 912 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TRANK1O15050 2925 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TRIOBPQ9H2D6 2365 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TBX19O60806 448 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 VIPP01282 170 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 RANBP1P43487 201 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 XCR1P46094 333 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 FAM46CQ5VWP2 391 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 METRNLQ641Q3 311 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 C16orf87Q6PH81 154 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 AHSA2Q719I0 299 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 P3H2Q8IVL5 708 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ADGRF3Q8IZF5 1079 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ANKRD53Q8N9V6 530 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 OR52J3Q8NH60 311 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 FGF13Q92913 245 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PIP5K1AQ99755 562 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 MENTQ9BUN1 341 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 LGR4Q9BXB1 951 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PBX4Q9BYU1 374 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ZDHHC4Q9NPG8 344 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TM7SF3Q9NS93 570 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 FAIMQ9NVQ4 179 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 TBCCD1Q9NVR7 557 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 RLIMQ9NVW2 624 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 CUEDC1Q9NWM3 386 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 THAP10Q9P2Z0 257 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PCDHGA2Q9Y5H1 932 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 CORINQ9Y5Q5 1042 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 COL4A3Q01955 1670 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PRAMEF33A0A0G2JMD5 474 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 IGLON5A6NGN9 336 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 PRAMEF10O60809 474 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF12P17014 697 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 SERPINB1P30740 379 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 BSGP35613 385 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 OPRD1P41143 372 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 MAPK12P53778 367 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 RAB15P59190 212 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 CYP4F2P78329 520 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 REEP5Q00765 189 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 MLIPQ5VWP3 458 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 PAGE2Q7Z2X7 111 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 NATD1Q8N6N6 113 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 OR5P2Q8WZ92 322 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 TM4SF18Q96CE8 201 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 F2RL3Q96RI0 385 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 NRTNQ99748 197 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 PSD2Q9BQI7 771 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 PCBD2Q9H0N5 130 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 SPATA7Q9P0W8 599 aa17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 CFAP20Q9Y6A4 193 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-207ENST00000486828 OR2A25A4D2G3 310 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 ANTXRLA6NF34 631 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 J3KTA2 159 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 J3QRK9 145 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 TFPTP0C1Z6 253 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 LIMS1P48059 325 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 CCR8P51685 355 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 DGCR6Q14129 220 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 WSCD2Q2TBF2 565 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 CYP27C1Q4G0S4 372 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 UBE2UQ5VVX9 321 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 ZNF605Q86T29 641 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SMPDL3AQ92484 453 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 PPP1R14BQ96C90 147 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 PDXPQ96GD0 296 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 NIPSNAP1Q9BPW8 284 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 NT5DC2Q9H857 520 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 OBP2AQ9NY56 170 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 HCN2Q9UL51 889 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 RAB23Q9ULC3 237 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SNX8Q9Y5X2 465 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 ENPP4Q9Y6X5 453 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 RTCAO00442 366 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 CAPN5O15484 640 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 DRD3P35462 400 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 OPRL1P41146 370 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 HMGA2P52926 109 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 TEKQ02763 1124 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 OCA2Q04671 838 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SAXO2Q658L1 398 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 REEP3Q6NUK4 255 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 LINC00299Q6ZSB3 139 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 SLCO6A1Q86UG4 719 aa17.13■□□□□ 0.33
PDLIM7-207ENST00000486828 RHOXF1Q8NHV9 184 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms