RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PACSIN3Q9UKS6 424 aa8.82□□□□□ -1
PTPN7-213ENST00000486116 LAMP3Q9UQV4 416 aa8.82□□□□□ -1
PTPN7-213ENST00000486116 SLC6A5Q9Y345 797 aa8.82□□□□□ -1
PTPN7-213ENST00000486116 hCG_1818297A0A087WSY0 165 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 ZNF839A8K0R7 811 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 H7C0C1 242 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 HS3ST1O14792 307 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 KPNA5O15131 536 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 CEP104O60308 925 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 TNFSF13O75888 250 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 RCBTB2O95199 551 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 LRATO95237 230 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 IGHV4-39P01824 125 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 THBS1P07996 1170 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 ZNF888P0CJ79 500 aaPredicted RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 ZNF16P17020 682 aaPredicted RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 IGFBP5P24593 272 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 HSD17B2P37059 387 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 ATP5OP48047 213 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 PCYT1AP49585 367 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 DIO3P55073 304 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 CASP9P55211 416 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 UBE2HP62256 183 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 DEFA6Q01524 100 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 KCNJ11Q14654 390 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 NFKBIBQ15653 356 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 ZNF791Q3KP31 576 aaPredicted RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 FASTKD1Q53R41 847 aaKnown RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 ODF2Q5BJF6 829 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 NHSL2Q5HYW2 709 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 CTSL3PQ5NE16 218 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 LIPNQ5VXI9 398 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 OPN5Q6U736 354 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 HSDL2Q6YN16 418 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 SCUBE1Q8IWY4 988 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 GCNT2Q8N0V5 402 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 PPM1NQ8N819 430 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 MFSD9Q8NBP5 474 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 PAQR8Q8TEZ7 354 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 INTS12Q96CB8 462 aaKnown RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 C1orf159Q96HA4 380 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 ZNF778Q96MU6 729 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 DDX56Q9NY93 547 aaKnown RBP8.81□□□□□ -1
PTPN7-213ENST00000486116 HYOU1Q9Y4L1 999 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 MMACHCQ9Y4U1 282 aa8.81□□□□□ -1
PTPN7-213ENST00000486116 LRRC14BA6NHZ5 514 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 PSMD12O00232 456 aaPredicted RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 NDUFS4O43181 175 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 NDUFS7O75251 213 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 H2AFZP0C0S5 128 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 RNH1P13489 461 aaKnown RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 HRH2P25021 359 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 IMPA1P29218 277 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 ATP5DP30049 168 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 UGT2B10P36537 528 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 CDKN1AP38936 164 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 CD79BP40259 229 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 RNF4P78317 190 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 VLDLRP98155 873 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 ACVR1Q04771 509 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 RPS6KA1Q15418 735 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 ACSBG2Q5FVE4 666 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 SLC22A10Q63ZE4 541 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 LYPD8Q6UX82 237 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 SH2D5Q6ZV89 423 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 H2AFVQ71UI9 128 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 CA13Q8N1Q1 262 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 TMEM52Q8NDY8 209 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 PPHLN1Q8NEY8 458 aaKnown RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 ZPLD1Q8TCW7 415 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 FAM136AQ96C01 138 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 ZMYND19Q96E35 227 aaPredicted RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 TRMT61AQ96FX7 289 aaKnown RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 MRFAP1L1Q96HT8 127 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 JSRP1Q96MG2 331 aaPredicted RBP8.8□□□□□ -1
PTPN7-213ENST00000486116 ZFP3Q96NJ6 502 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 QRFPRQ96P65 431 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 PANX2Q96RD6 677 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 TUBA1CQ9BQE3 449 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 FAM129AQ9BZQ8 928 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 FAM114A2Q9NRY5 505 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 HOMER3Q9NSC5 361 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 GALPQ9UBC7 116 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
PTPN7-213ENST00000486116 IGHV4-30-2A0A087WSY4 118 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 C4orf51C9J302 202 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 MSTNO14793 375 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 KLF4O43474 513 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 NIPSNAP2O75323 286 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 AVILO75366 819 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 TRIM3O75382 744 aaPredicted RBP8.79□□□□□ -1
PTPN7-213ENST00000486116 ACSL3O95573 720 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 SYF2O95926 243 aaKnown RBP8.79□□□□□ -1
PTPN7-213ENST00000486116 C1QAP02745 245 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 CATP04040 527 aaKnown RBP8.79□□□□□ -1
PTPN7-213ENST00000486116 HPNP05981 417 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 THBDP07204 575 aa8.79□□□□□ -1
PTPN7-213ENST00000486116 CTNNA2P26232 953 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms