RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SEMA4BQ9NPR2 832 aaPredicted RBP3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 C12orf4Q9NQ89 552 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 ZNF302Q9NR11 478 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 CISHQ9NSE2 258 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 TDP1Q9NUW8 608 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 TMLHEQ9NVH6 421 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 ALKBH4Q9NXW9 302 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 HCN3Q9P1Z3 774 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 DKK4Q9UBT3 224 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 VPS4AQ9UN37 437 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 PPIL1Q9Y3C6 166 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 SAMHD1Q9Y3Z3 626 aaKnown RBP3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 MFHAS1Q9Y4C4 1052 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 RIPK3Q9Y572 518 aa3.86□□□□□ -1.79
PRPF38B-205ENST00000485810 FER1L6Q2WGJ9 1857 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 C13orf42A0A1B0GVH6 325 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 A0A1W2PPM1 405 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 LOC390937A0A1W2PQ73 354 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TCRBV9S1A1TA0A576 114 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 BCLAF3A2AJT9 711 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM149AA5PLN7 773 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 MBD3L4A6NDZ8 208 aaPredicted RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 MBD3L3A6NE82 208 aaPredicted RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 OR52A4PA6NMU1 304 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 A8MUI8 341 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM171A2A8MVW0 826 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CDRT15L2A8MXV6 281 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 POC1B-GALNT4F8VUJ3 575 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 BIRC5O15392 142 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 KCNN4O15554 427 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 KCNAB3O43448 404 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 DENRO43583 198 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CST8O60676 142 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SNNO75324 88 aaPredicted RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 AVILO75366 819 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SEMA3DO95025 777 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TRUB2O95900 331 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 MBP02144 154 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 ERBB2P04626 1255 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 RLN1P04808 185 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CFIP05156 583 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 EDN1P05305 212 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 JUNP05412 331 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 UGT2B4P06133 528 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SNRPAP09012 282 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM58BPP0C7Q3 252 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 PIM1P11309 404 aaPredicted RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 MLNP12872 115 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 COX7A2P14406 83 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TCF4P15884 667 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 NT5EP21589 574 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TGM2P21980 687 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 KCNA3P22001 575 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CCNOP22674 350 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CD40LGP29965 261 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 HLA-FP30511 346 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 PKLRP30613 574 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SSTR1P30872 391 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 ATP5C1P36542 298 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 VHLP40337 213 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CASRP41180 1078 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 GPR4P46093 362 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FLT3LGP49771 235 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 RGS7P49802 495 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC26A2P50443 739 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SERPINB9P50453 376 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 BCAP31P51572 246 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CEBPGP53567 150 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 RABGGTBP53611 331 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 P2RX3P56373 397 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SOX10P56693 466 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 NRG3P56975 720 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 RPL26P61254 145 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 B4GALNT1Q00973 533 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 GLO1Q04760 184 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 CXCL9Q07325 125 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 INCA1Q0VD86 236 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 NAB1Q13506 487 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TFDP2Q14188 446 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 DPYSL3Q14195 570 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 PDK2Q15119 407 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 PDK3Q15120 406 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 STXBP2Q15833 593 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 ADRM1Q16186 407 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 GSTA3Q16772 222 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 HKDC1Q2TB90 917 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 C2CD6Q53TS8 623 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FNBP1LQ5T0N5 605 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 C1QL3Q5VWW1 255 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 ANKRD22Q5VYY1 191 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM160B1Q5W0V3 765 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 RAP1GAP2Q684P5 730 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TXNRD3NBQ6F5E7 133 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 DGAT2L7PQ6IED9 249 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 TTC33Q6PID6 262 aaPredicted RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM180AQ6UWF9 173 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 KYAT3Q6YP21 454 aaKnown RBP3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 SCARA5Q6ZMJ2 495 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 GADL1Q6ZQY3 521 aa3.85□□□□□ -1.79
PRPF38B-205ENST00000485810 COLCA1Q6ZS62 124 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms