RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CATSPER2Q96P56 530 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 SCNM1Q9BWG6 230 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 ASCL3Q9NQ33 180 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 SLC22A11Q9NSA0 550 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 AIG1Q9NVV5 245 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 BAIAP2L1Q9UHR4 511 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 PHF11Q9UIL8 331 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 WBP11Q9Y2W2 641 aaKnown RBP16.61■□□□□ 0.25
CHMP3-207ENST00000485465 MAP4K5Q9Y4K4 846 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 ATG4BQ9Y4P1 393 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 GPR45Q9Y5Y3 372 aa16.61■□□□□ 0.25
CHMP3-207ENST00000485465 SPTBP11277 2137 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TEX51A0A1B0GUA7 166 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 A0A1W2PR48 441 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TRABD2BA6NFA1 517 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 PROM1O43490 865 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 GUCY1B2O75343 617 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 RNH1P13489 461 aaKnown RBP16.6■□□□□ 0.25
CHMP3-207ENST00000485465 IDO1P14902 403 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 NCF2P19878 526 aaPredicted RBP16.6■□□□□ 0.25
CHMP3-207ENST00000485465 SPINK2P20155 84 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 RAB38P57729 211 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TAS2R50P59544 299 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 LCN10Q6JVE6 187 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 RIPOR1Q6ZS17 1223 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TIPARPQ7Z3E1 657 aaKnown RBP16.6■□□□□ 0.25
CHMP3-207ENST00000485465 EFCAB3Q8N7B9 438 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 OR51Q1Q8NH59 317 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 BCAS4Q8TDM0 211 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 MR1Q95460 341 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 EGLN2Q96KS0 407 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TSSK3Q96PN8 268 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 YIPF2Q9BWQ6 316 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 BRINP2Q9C0B6 783 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 AKIRIN1Q9H9L7 192 aaPredicted RBP16.6■□□□□ 0.25
CHMP3-207ENST00000485465 MYNNQ9NPC7 610 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TEX10Q9NXF1 929 aaPredicted RBP16.6■□□□□ 0.25
CHMP3-207ENST00000485465 MS4A12Q9NXJ0 267 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 TRPC4Q9UBN4 977 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 HEY2Q9UBP5 337 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 ARL2BPQ9Y2Y0 163 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 AK5Q9Y6K8 562 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 SPACA6W5XKT8 324 aa16.6■□□□□ 0.25
CHMP3-207ENST00000485465 NDUFAB1O14561 156 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 BRINP1O60477 761 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 IL3P08700 152 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CCNYL3P0C7X3 344 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 PCSK2P16519 638 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CPN2P22792 545 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CD82P27701 267 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 ASMTP46597 345 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 SHC2P98077 582 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 MAP7Q14244 749 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 PTGR1Q14914 329 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 RPS6KA2Q15349 733 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 NDUFAF5Q5TEU4 345 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 FAM71E1Q6IPT2 247 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 ZNF517Q6ZMY9 492 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-207ENST00000485465 IKBIPQ70UQ0 350 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 OVCH1Q7RTY7 1134 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CLNKQ7Z7G1 428 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 FAM9CQ8IZT9 166 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 TMEM132CQ8N3T6 1108 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CLHC1Q8NHS4 586 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 CDC26Q8NHZ8 85 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 ADAMTS18Q8TE60 1221 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 NXPE2Q96DL1 559 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 PEX11GQ96HA9 241 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 MKKSQ9NPJ1 570 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-207ENST00000485465 IFT80Q9P2H3 777 aaPredicted RBP16.59■□□□□ 0.25
CHMP3-207ENST00000485465 PADI1Q9ULC6 663 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
CHMP3-207ENST00000485465 SCN3AQ9NY46 2000 aa16.58■□□□□ 0.25
CHMP3-207ENST00000485465 FAM227AF5H4B4 570 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 PSMD12O00232 456 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 CYR61O00622 381 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 AIFM1O95831 613 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 IL10P22301 178 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 TLX1P31314 330 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 BUD31P41223 144 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 XCR1P46094 333 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 MRPL19P49406 292 aaKnown RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 ATP4BP51164 291 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 CLDN8P56748 225 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 IRX1P78414 480 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 TNFRSF17Q02223 184 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 KLC1Q07866 573 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 C2orf80Q0P641 193 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 HEPACAMQ14CZ8 416 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 PDCD4Q53EL6 469 aaKnown RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 C18orf63Q68DL7 685 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 FAM199XQ6PEV8 388 aaPredicted RBP16.58■□□□□ 0.24
CHMP3-207ENST00000485465 ESX1Q8N693 406 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 FAM47BQ8NA70 645 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 FKBP10Q96AY3 582 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 TBC1D20Q96BZ9 403 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 CSF3RQ99062 836 aa16.58■□□□□ 0.24
CHMP3-207ENST00000485465 FAIM2Q9BWQ8 316 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms