RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 POPDC3Q9HBV1 291 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 DNAJC11Q9NVH1 559 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 WWOXQ9NZC7 414 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 GPRC5BQ9NZH0 403 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 MRPS33Q9Y291 106 aaKnown RBP17.89■□□□□ 0.45
COL27A1-205ENST00000485397 SNX24Q9Y343 169 aa17.89■□□□□ 0.45
COL27A1-205ENST00000485397 CSMD2Q7Z408 3487 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 F8P00451 2351 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 A0A088AWK7 358 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 USP27XA6NNY8 438 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 A8MVJ9 347 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 EFCAB8A8MWE9 144 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 PHGDHO43175 533 aaKnown RBP17.88■□□□□ 0.45
COL27A1-205ENST00000485397 OR6B1O95007 311 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 IFNA16P05015 189 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF10P21506 573 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-205ENST00000485397 GSTM2P28161 218 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 HSPA7P48741 367 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 SLC12A2P55011 1212 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 MTTPP55157 894 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 MRPS25P82663 173 aaKnown RBP17.88■□□□□ 0.45
COL27A1-205ENST00000485397 BMPR2Q13873 1038 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 TRIM40Q6P9F5 258 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 IL20RBQ6UXL0 311 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 ZBED8Q8IZ13 594 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 TMEM132CQ8N3T6 1108 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 RPRMLQ8N4K4 120 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 SNX31Q8N9S9 440 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 PSD4Q8NDX1 1056 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 C14orf79Q96F83 325 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 SEC16BQ96JE7 1060 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 F2RL3Q96RI0 385 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 PITHD1Q9GZP4 211 aaPredicted RBP17.88■□□□□ 0.45
COL27A1-205ENST00000485397 PLSCR2Q9NRY7 297 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 HPF1Q9NWY4 346 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 NSMCE4AQ9NXX6 385 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 DAPP1Q9UN19 280 aa17.88■□□□□ 0.45
COL27A1-205ENST00000485397 CXorf49A8MYA2 514 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-205ENST00000485397 WWP2O00308 870 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 CLGNO14967 610 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 CTNSO60931 367 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 TUBB4AP04350 444 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 CD22P20273 847 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 GGT5P36269 586 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 RPL21P46778 160 aaKnown RBP17.87■□□□□ 0.45
COL27A1-205ENST00000485397 POU4F1Q01851 419 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 TLE4Q04727 773 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 DOC2AQ14183 400 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 OR4D1Q15615 310 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 ELAVL1Q15717 326 aaKnown RBP17.87■□□□□ 0.45
COL27A1-205ENST00000485397 GPSM1Q86YR5 675 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 TCAIMQ8N3R3 496 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF321PQ8N8H1 164 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 CHTF18Q8WVB6 975 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 ASB15Q8WXK1 588 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 ALOXE3Q9BYJ1 711 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 COPS7BQ9H9Q2 264 aaPredicted RBP17.87■□□□□ 0.45
COL27A1-205ENST00000485397 PRDM7Q9NQW5 492 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 MYOTQ9UBF9 498 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 POLQO75417 2590 aa17.87■□□□□ 0.45
COL27A1-205ENST00000485397 CCDC168Q8NDH2 2452 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 A0A0G2JMM0 328 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 A0A1W2PPB8 328 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 A0A1W2PRS3 328 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 FAM166BA8MTA8 275 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 KIR3DP1A8MWS1 328 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 G3V3Y1 287 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 STK16O75716 305 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 CCDC166P0CW27 439 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 CD1DP15813 335 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 SSTR1P30872 391 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 SOX3P41225 446 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 PPIAP62937 165 aaKnown RBP17.86■□□□□ 0.45
COL27A1-205ENST00000485397 ZNF750Q32MQ0 723 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 EMC4Q5J8M3 183 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 TMEM211Q6ICI0 200 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 SULT1C3Q6IMI6 304 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 ARHGAP11AQ6P4F7 1023 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 GPALPP1Q8IXQ4 340 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 OR2M7Q8NG81 312 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 PTPMT1Q8WUK0 201 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-205ENST00000485397 WDR34Q96EX3 536 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 RASL10BQ96S79 203 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 TREX2Q9BQ50 279 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-205ENST00000485397 UCK2Q9BZX2 261 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 OR8D2Q9GZM6 311 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 TP63Q9H3D4 680 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-205ENST00000485397 EHD1Q9H4M9 534 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 CNOT10Q9H9A5 744 aaKnown RBP17.86■□□□□ 0.45
COL27A1-205ENST00000485397 VTI1BQ9UEU0 232 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 RNF6Q9Y252 685 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 CLCA3PQ9Y6N3 262 aa17.86■□□□□ 0.45
COL27A1-205ENST00000485397 CCDC188H7C350 402 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 RTCAO00442 366 aaKnown RBP17.85■□□□□ 0.45
COL27A1-205ENST00000485397 EPORP19235 508 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 GMPRP36959 345 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 HK2P52789 917 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 GNG11P61952 73 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 PLGLB1Q02325 96 aa17.85■□□□□ 0.45
COL27A1-205ENST00000485397 ID2Q02363 134 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms