RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ADAM12O43184 909 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 MLNRO43193 412 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TSHBP01222 138 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 OPN1MWP04001 364 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 PCCBP05166 539 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 FRMD6-AS1P0C7T7 363 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 GPR89BP0CG08 455 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 OPN1MW2P0DN77 364 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 OPN1MW3P0DN78 364 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CALCBP10092 127 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 THRBP10828 461 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 KRT13P13646 458 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 GNSP15586 552 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CYP2F1P24903 491 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 ACKR3P25106 362 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 SLC6A8P48029 635 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 NLRP11P59045 1033 aaKnown RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 SP3Q02447 781 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 MFGE8Q08431 387 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 LRRC74AQ0VAA2 488 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 KEAP1Q14145 624 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 GPAT3Q53EU6 434 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CMPK2Q5EBM0 449 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TECRLQ5HYJ1 363 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 C9orf50Q5SZB4 431 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 LYPLAL1Q5VWZ2 237 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 PLPP4Q5VZY2 271 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 HIST2H2AA3Q6FI13 130 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CASC1Q6TDU7 716 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 FCRLAQ7L513 359 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 BNIPLQ7Z465 357 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TRMT11Q7Z4G4 463 aaKnown RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 YRDCQ86U90 279 aaKnown RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 PIGZQ86VD9 579 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 KIRREL3Q8IZU9 778 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 NAGSQ8N159 534 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TEX26Q8N6G2 289 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 BANPQ8N9N5 519 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 OR13C5Q8NGS8 318 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CHPT1Q8WUD6 406 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 NEUROG1Q92886 237 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 MRPL53Q96EL3 112 aaKnown RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 LURAP1Q96LR2 239 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 PCDHB18PQ96TA0 734 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 LPAR4Q99677 370 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 AGPAT1Q99943 283 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 CBWD1Q9BRT8 395 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 ERP44Q9BS26 406 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM204Q9BSN7 226 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF665Q9H7R5 613 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 EVA1AQ9H8M9 152 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 HPS4Q9NQG7 708 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 DCAF16Q9NXF7 216 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 PLEK2Q9NYT0 353 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 VPS54Q9P1Q0 977 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF624Q9P2J8 865 aaPredicted RBP4.02□□□□□ -1.77
VPS13A-211ENST00000484581 WDR37Q9Y2I8 494 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 MFHAS1Q9Y4C4 1052 aa4.02□□□□□ -1.77
VPS13A-211ENST00000484581 A0A087WUV0 522 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 TRIM49BA6NDI0 452 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 PRAC2D3DTV9 90 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 PRSS44E7EML9 344 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 C16orf97H3BN30 126 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 E2F3O00716 465 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 RIPK2O43353 540 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 GMFGO60234 142 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CYTIPO60759 359 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 VPS26AO75436 327 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SAP30O75446 220 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 TOM1L1O75674 476 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 PPP1R3DO95685 299 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 APBB3O95704 486 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CTNNA2P26232 953 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 PRDX2P32119 198 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF132P52740 706 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 GBX2P52951 348 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 ART1P52961 327 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 DSCR9P59020 149 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 DCDC1P59894 354 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 HMGN5P82970 282 aaKnown RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 FUT7Q11130 342 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CNTN1Q12860 1018 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 NME3Q13232 169 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SGCGQ13326 291 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 P2RY6Q15077 328 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 OR1C1Q15619 314 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 LRRC37A5PQ49AS3 106 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 CEP55Q53EZ4 464 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 MPPE1Q53F39 396 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 AGKQ53H12 422 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 C9orf57Q5W0N0 161 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 WBP2NLQ6ICG8 309 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 TMEM64Q6YI46 380 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SLC22A16Q86VW1 577 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 SPATA2LQ8IUW3 424 aaPredicted RBP4.01□□□□□ -1.77
VPS13A-211ENST00000484581 UNC5CLQ8IV45 518 aa4.01□□□□□ -1.77
VPS13A-211ENST00000484581 ZNF843Q8N446 348 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms