RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ID2Q02363 134 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 UBAP2LQ14157 1087 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 ACER2Q5QJU3 275 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 KHDRBS2Q5VWX1 349 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 SCUBE1Q8IWY4 988 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 ACOT4Q8N9L9 421 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 OR52B6Q8NGF0 335 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 PRR7Q8TB68 274 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 HAS2Q92819 552 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 ATP6V1E2Q96A05 226 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 MTFMTQ96DP5 389 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 CMTM7Q96FZ5 175 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 ZNF354BQ96LW1 612 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 KCNC2Q96PR1 638 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 SEMA4BQ9NPR2 832 aaPredicted RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 DMRT3Q9NQL9 472 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 TEKT2Q9UIF3 430 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 PCTPQ9UKL6 214 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 MRPS33Q9Y291 106 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 MMACHCQ9Y4U1 282 aa11.5□□□□□ -0.57
MSH5-216ENST00000484309 TNPO3Q9Y5L0 923 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 DIDO1Q9BTC0 2240 aaKnown RBP11.5□□□□□ -0.57
MSH5-216ENST00000484309 ICE1Q9Y2F5 2266 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 TRAV17A0A0B4J275 112 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 OR5H15A6NDH6 313 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 A8MT66 165 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 CYR61O00622 381 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 LDB3O75112 727 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 ETHE1O95571 254 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 COL6A2P12110 1019 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 NEK2P51955 445 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 CCNG1P51959 295 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 HSD17B7P56937 341 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 TAS2R50P59544 299 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 PMP22Q01453 160 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 PCDH1Q08174 1060 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 ZRSR2Q15696 482 aaKnown RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 MEP1AQ16819 746 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 AP5B1Q2VPB7 878 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 LGSNQ5TDP6 509 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 LIPJQ5W064 366 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 H3F3CQ6NXT2 135 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 FAM180AQ6UWF9 173 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 CHSY3Q70JA7 882 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 FAM26EQ8N5C1 309 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 NFAM1Q8NET5 270 aaPredicted RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 ELP5Q8TE02 316 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 ADAMTS18Q8TE60 1221 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 THAP3Q8WTV1 239 aaPredicted RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 UBLCP1Q8WVY7 318 aaPredicted RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 MRPL57Q9BQC6 102 aaKnown RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 TBCDQ9BTW9 1192 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 HES7Q9BYE0 225 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 MRPL46Q9H2W6 279 aaKnown RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 CDCP1Q9H5V8 836 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 AGPAT4Q9NRZ5 378 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 KCMF1Q9P0J7 381 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 TMEM216Q9P0N5 145 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 CLDN16Q9Y5I7 305 aa11.49□□□□□ -0.57
MSH5-216ENST00000484309 SPTBN1Q01082 2364 aaKnown RBP11.49□□□□□ -0.57
MSH5-216ENST00000484309 TRBV11-1A0A0K0K1C0 115 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 A0A1B0GTL3 188 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 ANKUB1A6NFN9 424 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SMIM23A6NLE4 172 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 GABRR3A8MPY1 467 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 STX16-NPEPL1H3BU86 382 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 PPP6CO00743 305 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CLDN4O14493 209 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 PLPP1O14494 284 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 STX16O14662 325 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SEMA7AO75326 666 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 PRKRAO75569 313 aaKnown RBP11.48□□□□□ -0.57
MSH5-216ENST00000484309 AGFG2O95081 481 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CLDN9O95484 217 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CBX6O95503 412 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SHBGP04278 402 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 IFNA16P05015 189 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 RPS17P08708 135 aaKnown RBP11.48□□□□□ -0.57
MSH5-216ENST00000484309 HIST1H1TP22492 207 aaPredicted RBP11.48□□□□□ -0.57
MSH5-216ENST00000484309 CPN2P22792 545 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SERPINB1P30740 379 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CDH13P55290 713 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 PHEXP78562 749 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TRAF3Q13114 568 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TUBA3CQ13748 450 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TMEM35AQ53FP2 167 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 DEPDC1Q5TB30 811 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 FHL5Q5TD97 284 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 TUBA3EQ6PEY2 450 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
MSH5-216ENST00000484309 RPS19BP1Q86WX3 136 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms