RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ZIC1Q15915 447 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 INAVAQ3KP66 663 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 KCTD21Q4G0X4 260 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 FAM98BQ52LJ0 330 aaKnown RBP16.35■□□□□ 0.21
MRPL28-210ENST00000483764 NHSL2Q5HYW2 709 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 HMBOX1Q6NT76 420 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 USP53Q70EK8 1073 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 PLXDC1Q8IUK5 500 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 CREB3L4Q8TEY5 395 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 TFAP2CQ92754 450 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 TESCQ96BS2 214 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 CD180Q99467 661 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 MAP3K3Q99759 626 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 MS4A8Q9BY19 250 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 ACTL8Q9H568 366 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 UBAP1Q9NZ09 502 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 MAN2B2Q9Y2E5 1009 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 MYRFQ9Y2G1 1151 aa16.35■□□□□ 0.21
MRPL28-210ENST00000483764 TLCD2A6NGC4 264 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 SLC9B1P1A6NJY1 282 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 H6PDO95479 791 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 SERPIND1P05546 499 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 SMIM18P0DKX4 95 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 GGT1P19440 569 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 DUSP3P51452 185 aaPredicted RBP16.34■□□□□ 0.21
MRPL28-210ENST00000483764 DAB2P98082 770 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 CFHR1Q03591 330 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 ACSM2AQ08AH3 577 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 SPEM2Q0P670 501 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 EPS8Q12929 822 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 APOFQ13790 326 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 PERM1Q5SV97 790 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 C6orf52Q5T4I8 152 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 DEPDC1Q5TB30 811 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 KHDRBS2Q5VWX1 349 aaKnown RBP16.34■□□□□ 0.21
MRPL28-210ENST00000483764 ACSM2BQ68CK6 577 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 CHTF18Q8WVB6 975 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 THAP11Q96EK4 314 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 FCRL4Q96PJ5 515 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 OR2A5Q96R48 311 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 ZFYVE21Q9BQ24 234 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 KCNH6Q9H252 994 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 SYNPO2LQ9H987 977 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 EGFL7Q9UHF1 273 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
MRPL28-210ENST00000483764 A0A096LPI6 279 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SAP18O00422 153 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 CDX4O14627 284 aaPredicted RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 FLRT2O43155 660 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 PGRP06401 933 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 RAP2AP10114 183 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 MYF6P23409 242 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 C21orf58P58505 322 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 MYBPC1Q00872 1141 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 LRRC74AQ0VAA2 488 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SLC14A1Q13336 389 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 DYNC1I2Q13409 638 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SQSTM1Q13501 440 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SPIN4Q56A73 249 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 RABL3Q5HYI8 236 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 GLYATQ6IB77 296 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 NOXRED1Q6NXP6 359 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SLC2A7Q6PXP3 512 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 WDR74Q6RFH5 385 aaPredicted RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 C1orf52Q8N6N3 182 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 C19orf47Q8N9M1 422 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 C11orf24Q96F05 449 aaPredicted RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 ITCHQ96J02 903 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 F2RL3Q96RI0 385 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 CIB1Q99828 191 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 CCDC3Q9BQI4 270 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SEMA6AQ9H2E6 1030 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 MAGIXQ9H6Y5 334 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 PAPOLBQ9NRJ5 636 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 SEMA4GQ9NTN9 838 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 AHSPQ9NZD4 102 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 RUVBL1Q9Y265 456 aaKnown RBP16.33■□□□□ 0.2
MRPL28-210ENST00000483764 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.2
MRPL28-210ENST00000483764 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 C7orf72A4D263 438 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 LRIT2A6NDA9 550 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 H0YAE9 185 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 NDUFS4O43181 175 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 MYO1DO94832 1006 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 SEMA3DO95025 777 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 HPRP00739 348 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 C9P02748 559 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 BCKDHAP12694 445 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 CALRP27797 417 aaKnown RBP16.32■□□□□ 0.2
MRPL28-210ENST00000483764 NBL1P41271 181 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 CHRNB3Q05901 458 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 CSRP2Q16527 193 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 TMEM35AQ53FP2 167 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 VN1R4Q7Z5H5 301 aa16.32■□□□□ 0.2
MRPL28-210ENST00000483764 ASPGQ86U10 573 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms