RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 RDH12Q96NR8 316 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 CAMK1GQ96NX5 476 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 SLC29A3Q9BZD2 475 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 B3GNT4Q9C0J1 378 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 ABCD2Q9UBJ2 740 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 BAG5Q9UL15 447 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 CCL27Q9Y4X3 112 aa9.96□□□□□ -0.81
APTX-225ENST00000482687 POLR3HQ9Y535 204 aaPredicted RBP9.96□□□□□ -0.81
APTX-225ENST00000482687 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TEX51A0A1B0GUA7 166 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 BBIP1A8MTZ0 92 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 SLC28A1O00337 649 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 SHOXO15266 292 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 RGS14O43566 566 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 VPS4BO75351 444 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TNFP01375 233 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 WNT1P04628 370 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 SNRPB2P08579 225 aaKnown RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 JUPP14923 745 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 RABIFP47224 123 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 CXCL12P48061 93 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 UFM1P61960 85 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 RPL38P63173 70 aaKnown RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 C1orf61Q13536 156 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 RPS6KA2Q15349 733 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 SF1Q15637 639 aaKnown RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 UAP1L1Q3KQV9 507 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 RFTN2Q52LD8 501 aaPredicted RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 ATAD3CQ5T2N8 411 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 THAP5Q7Z6K1 395 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 NRROSQ86YC3 692 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TMEFF1Q8IYR6 380 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TBC1D21Q8IYX1 336 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 ABCA7Q8IZY2 2146 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 USP7Q93009 1102 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TEX37Q96LM6 180 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 MTERF1Q99551 399 aaKnown RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 SGPP1Q9BX95 441 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 ACPTQ9BZG2 426 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 SPNS1Q9H2V7 528 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 TM9SF3Q9HD45 589 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 ACTR3BQ9P1U1 418 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.82
APTX-225ENST00000482687 PCDHGB1Q9Y5G3 927 aa9.96□□□□□ -0.82
APTX-225ENST00000482687 K7ESF4 209 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 NR5A2O00482 541 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 ZW10O43264 779 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SEC22BO75396 215 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 DLGAP3O95886 979 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 HPRP00739 348 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 RPN2P04844 631 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 TRAPPC2P0DI81 140 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 TRAPPC2BP0DI82 140 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 UMPSP11172 480 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 MTHFD1P11586 935 aaKnown RBP9.95□□□□□ -0.82
APTX-225ENST00000482687 ELK4P28324 431 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 DDOSTP39656 456 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 AP2S1P53680 142 aaPredicted RBP9.95□□□□□ -0.82
APTX-225ENST00000482687 ERVK-8P63133 956 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 ZXDAP98168 799 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 FZD2Q14332 565 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SLBPQ14493 270 aaKnown RBP eCLIP9.95□□□□□ -0.82
APTX-225ENST00000482687 MAPK11Q15759 364 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PRAMEF14Q5SWL7 426 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PRAMEF13Q5VWM6 474 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SLCO4C1Q6ZQN7 724 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SPATA19Q7Z5L4 167 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 FUNDC1Q8IVP5 155 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PHACTR4Q8IZ21 702 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PIAS4Q8N2W9 510 aaPredicted RBP9.95□□□□□ -0.82
APTX-225ENST00000482687 MIER2Q8N344 545 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 FAM109AQ8N4B1 249 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 LINC01555Q8NAE3 123 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 ZNF740Q8NDX6 193 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SLC5A11Q8WWX8 675 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PATE1Q8WXA2 126 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 FIG4Q92562 907 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 HTRA1Q92743 480 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SH3KBP1Q96B97 665 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 DEPDC7Q96QD5 511 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 COQ7Q99807 217 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 MENTQ9BUN1 341 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 CHID1Q9BWS9 393 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 ING2Q9H160 280 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 DSN1Q9H410 356 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 ATP13A2Q9NQ11 1180 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 POLE4Q9NR33 117 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 AIG1Q9NVV5 245 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SNX6Q9UNH7 406 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 SNX5Q9Y5X3 404 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 GPR45Q9Y5Y3 372 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 KCNE2Q9Y6J6 123 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 PMF1-BGLAPU3KQ54 211 aa9.95□□□□□ -0.82
APTX-225ENST00000482687 TP53BP1Q12888 1972 aaPredicted RBP9.94□□□□□ -0.82
APTX-225ENST00000482687 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms