RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FESP07332 822 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 SPATA31D3P0C874 917 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 SLC2A4P14672 509 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT1A6P19224 532 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT1A1P22309 533 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT1A4P22310 534 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 PRDX3P30048 256 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT1A3P35503 534 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UGT1A5P35504 534 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 EIF2DP41214 584 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 GSK3BP49841 420 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 GALK1P51570 392 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 NME5P56597 212 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 UFM1P61960 85 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 TUBA4AP68366 448 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ELP6Q0PNE2 266 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 RALGDSQ12967 914 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 CSTF3Q12996 717 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 ZNF77Q15935 545 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 MAPKAPK3Q16644 382 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 LRRC26Q2I0M4 334 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ATP13A5Q4VNC0 1218 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 FAM98BQ52LJ0 330 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 ZNF805Q5CZA5 627 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 NANOGP8Q6NSW7 305 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 DPY19L3Q6ZPD9 716 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 SPATA31D4Q6ZUB0 917 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 DPPA4Q7L190 304 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 KLHDC8AQ8IYD2 350 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 KIAA2013Q8IYS2 634 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 SFRP1Q8N474 314 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 OR2A12Q8NGT7 310 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 OR6K2Q8NGY2 324 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 HM13Q8TCT9 377 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ZFAND2BQ8WV99 257 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 SLC13A3Q8WWT9 602 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 FBXL8Q96CD0 374 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 CMTM7Q96FZ5 175 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 RBM18Q96H35 190 aaKnown RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 ZNF514Q96K75 400 aaPredicted RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 NSMCE2Q96MF7 247 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 FOPNLQ96NB1 174 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 RDH12Q96NR8 316 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ACOX2Q99424 681 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 CGREF1Q99674 301 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 LBHD1Q9BQE6 289 aaPredicted RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 SPATA16Q9BXB7 569 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 PCDHAC1Q9H158 963 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ELOVL6Q9H5J4 265 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 GORASP2Q9H8Y8 452 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ACTR8Q9H981 624 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 NANOGQ9H9S0 305 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 AGPAT4Q9NRZ5 378 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 PNPLA3Q9NST1 481 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 DNAJC11Q9NVH1 559 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 IL36AQ9UHA7 158 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 ZNF490Q9ULM2 529 aaPredicted RBP7.41□□□□□ -1.22
SNX13-208ENST00000482558 SLC27A6Q9Y2P4 619 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 LYVE1Q9Y5Y7 322 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 COMMD3-BMI1R4GMX3 469 aa7.41□□□□□ -1.22
SNX13-208ENST00000482558 MTCL1Q9Y4B5 1905 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 SCN8AQ9UQD0 1980 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 C5orf67F2Z3F1 127 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ANKRD28O15084 1053 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ATG13O75143 517 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 SEC22BO75396 215 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 MYO1DO94832 1006 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 LDLRP01130 860 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CATP04040 527 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 RHOP08100 348 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 C1SP09871 688 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 LINC00271P0C7V0 271 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ZCCHC18P0CG32 403 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 GLI4P10075 376 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 G6PDP11413 515 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CDH1P12830 882 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CD1EP15812 388 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CTNNB1P35222 781 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 MSX2P35548 267 aaPredicted RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 ZFP36L2P47974 494 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 SLC6A12P48065 614 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ERFP50548 548 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ZNF41P51814 821 aaPredicted RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 CLDN8P56748 225 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 C21orf58P58505 322 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 FPGSQ05932 587 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ABRAXAS2Q15018 415 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 EIF4HQ15056 248 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 SEC23BQ15437 767 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TEAD2Q15562 447 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ATP6AP1Q15904 470 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CYP51A1Q16850 503 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TIGD2Q4W5G0 525 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ATG9BQ674R7 924 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 KRT80Q6KB66 452 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 FAM180AQ6UWF9 173 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 H1FNTQ75WM6 255 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms