RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 PCGF5Q86SE9 256 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 TMPRSS11BQ86T26 416 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 RPS19BP1Q86WX3 136 aaKnown RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 CNTN4Q8IWV2 1026 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 AFAP1L2Q8N4X5 818 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 CPSF7Q8N684 471 aaKnown RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 ANKRD53Q8N9V6 530 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 TMEM178AQ8NBL3 297 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 FAM98AQ8NCA5 519 aaKnown RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 PLPP5Q8NEB5 264 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 OR4K1Q8NGD4 311 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 SPATA3Q8NHX4 192 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 NT5CQ8TCD5 201 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 FAM45AQ8TCE6 357 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 UTP15Q8TED0 518 aaKnown RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 THAP3Q8WTV1 239 aaPredicted RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 ATL1Q8WXF7 558 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 CCT6BQ92526 530 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 SCMH1Q96GD3 660 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 GPR137Q96N19 417 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 EGFL8Q99944 293 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 WDR83Q9BRX9 315 aaKnown RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 NAT9Q9BTE0 207 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 FAM129AQ9BZQ8 928 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 TRIM31Q9BZY9 425 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 KLHL31Q9H511 634 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 NECTIN3Q9NQS3 549 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 ZFP69BQ9UJL9 534 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 SNX12Q9UMY4 172 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 SLC22A14Q9Y267 594 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 RNF114Q9Y508 228 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 KLF2Q9Y5W3 355 aaPredicted RBP8.42□□□□□ -1.06
HLA-B-253ENST00000481849 PSAT1Q9Y617 370 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 NUP210LQ5VU65 1888 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 PCM1Q15154 2024 aa8.42□□□□□ -1.06
HLA-B-253ENST00000481849 NCF1BA6NI72 391 aaPredicted RBP8.41□□□□□ -1.06
HLA-B-253ENST00000481849 NCF1CA8MVU1 366 aaPredicted RBP8.41□□□□□ -1.06
HLA-B-253ENST00000481849 C4orf51C9J302 202 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 C19orf84I3L1E1 186 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 SLC25A12O75746 678 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 PIAS1O75925 651 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 NEURL1O76050 574 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 MLYCDO95822 493 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 ENO2P09104 434 aaPredicted RBP8.41□□□□□ -1.06
HLA-B-253ENST00000481849 NCF1P14598 390 aaPredicted RBP8.41□□□□□ -1.06
HLA-B-253ENST00000481849 ABOP16442 354 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 IL10P22301 178 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 GDF5P43026 501 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 ITGA8P53708 1063 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 SKP1P63208 163 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 BTN3A2P78410 334 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 REEP5Q00765 189 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 CDSNQ15517 529 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 NXPE4Q6UWF7 544 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 SBSNQ6UWP8 590 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 RPTNQ6XPR3 784 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 FRA10AC1Q70Z53 315 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 VN1R5Q7Z5H4 357 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 STRA8Q7Z7C7 330 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 SPPL2CQ8IUH8 684 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 PDIK1LQ8N165 341 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 CA13Q8N1Q1 262 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 HORMAD2Q8N7B1 307 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 ELP5Q8TE02 316 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 FRMD6Q96NE9 622 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 AIF1LQ9BQI0 150 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 TRIM51Q9BSJ1 452 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 KRTAP17-1Q9BYP8 105 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 PNO1Q9NRX1 252 aaKnown RBP8.41□□□□□ -1.06
HLA-B-253ENST00000481849 TGP01266 2768 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 TLN2Q9Y4G6 2542 aa8.41□□□□□ -1.06
HLA-B-253ENST00000481849 SEC16AO15027 2179 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 TRBV11-1A0A0K0K1C0 115 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 MYOCOSA0A1B0GUC4 107 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 FAM95CA0A1B0GW59 222 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ASPDHA6ND91 283 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 URADA6NGE7 173 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SAGE2PA6NJ88 616 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ASNA1O43681 348 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 NME2P1O60361 137 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 CDC40O60508 579 aaKnown RBP eCLIP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 MYO1DO94832 1006 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 WDR47O94967 919 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 RNH1P13489 461 aaKnown RBP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ZNF24P17028 368 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ZNF37AP17032 561 aaPredicted RBP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 NME2P22392 152 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 IVDP26440 423 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PPP2R1BP30154 601 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PTGER1P34995 402 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 AHRP35869 848 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 CYB561P49447 251 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 SMSP52788 366 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 MLF1P58340 268 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 DR1Q01658 176 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 FASTKD3Q14CZ7 662 aaKnown RBP8.4□□□□□ -1.06
HLA-B-253ENST00000481849 MORF4L2Q15014 288 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 PPP1R3AQ16821 1122 aa8.4□□□□□ -1.06
HLA-B-253ENST00000481849 ZNF630Q2M218 657 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms