RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 ZNF33BQ06732 778 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 ACTN3Q08043 901 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 LAPTM5Q13571 262 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 ZRSR2Q15696 482 aaKnown RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 UNC50Q53HI1 259 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 SGO1Q5FBB7 561 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 PAGE2BQ5JRK9 111 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 C18orf63Q68DL7 685 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 LETMD1Q6P1Q0 360 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 DGAT2L6Q6ZPD8 337 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 QSOX2Q6ZRP7 698 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 RIPOR1Q6ZS17 1223 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 CCDC91Q7Z6B0 441 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 OR4N5Q8IXE1 308 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 ACOT4Q8N9L9 421 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 TTLQ8NG68 377 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 WDR20Q8TBZ3 569 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 UBLCP1Q8WVY7 318 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 FAR2Q96K12 515 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 SIGLEC12Q96PQ1 595 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 TAAR6Q96RI8 345 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 SERINC2Q96SA4 455 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 HBEGFQ99075 208 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 MRPL57Q9BQC6 102 aaKnown RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 LIN28AQ9H9Z2 209 aaKnown RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 PRDM9Q9NQV7 894 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 PNO1Q9NRX1 252 aaKnown RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 DAPP1Q9UN19 280 aa10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 G3BP2Q9UN86 482 aaKnown RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 USP9YO00507 2555 aaPredicted RBP10.68□□□□□ -0.7
RAPGEF1-207ENST00000481260 URADA6NGE7 173 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PSMD12O00232 456 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TMPRSS11DO60235 418 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 LDB3O75112 727 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 MYO1DO94832 1006 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 RBP1P09455 135 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 CNTFP26441 200 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TNFRSF8P28908 595 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 HSD17B3P37058 310 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TNFSF10P50591 281 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 MTTPP55157 894 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 ARG2P78540 354 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 ZNF169Q14929 603 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 NR6A1Q15406 480 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 HIST2H2ACQ16777 129 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 DEPDC1Q5TB30 811 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 IRAK1BP1Q5VVH5 260 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 KHDRBS2Q5VWX1 349 aaKnown RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 HIST2H2AA3Q6FI13 130 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 H3F3CQ6NXT2 135 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TRIM40Q6P9F5 258 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TAOK1Q7L7X3 1001 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 MMP21Q8N119 569 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 L3MBTL4Q8NA19 623 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 OR4F6Q8NGB9 312 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 OR1N1Q8NGS0 311 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PPP4R1Q8TF05 950 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 THAP3Q8WTV1 239 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 ANKRD9Q96BM1 317 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 TMEM237Q96Q45 408 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 LMF1Q96S06 567 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PITHD1Q9GZP4 211 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 MRPL46Q9H2W6 279 aaKnown RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 KCNK13Q9HB14 408 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PRM3Q9NNZ6 103 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 MMP25Q9NPA2 562 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PRTFDC1Q9NRG1 225 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 PSMC3IPQ9P2W1 217 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 C19orf25Q9UFG5 118 aaPredicted RBP10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 FBXW2Q9UKT8 454 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 RAB21Q9UL25 225 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 ATG4BQ9Y4P1 393 aa10.67□□□□□ -0.7
RAPGEF1-207ENST00000481260 CPAMD8Q8IZJ3 1885 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 SAGE2PA6NJ88 616 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 GLOD5A6NK44 160 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 H0YIV9 168 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 STX16-NPEPL1H3BU86 382 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 HRKO00198 91 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 STX16O14662 325 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 SMIM24O75264 130 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 SEMA7AO75326 666 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 ERLIN1O75477 346 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 COL6A2P12110 1019 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 CHN1P15882 459 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 IL10P22301 178 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 HIST1H1TP22492 207 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 JAK1P23458 1154 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 BSGP35613 385 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 SLC13A2Q13183 592 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 SLAMF1Q13291 335 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 TSNAXIP1Q2TAA8 658 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 EIF2S3LQ2VIR3 472 aaKnown RBP10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 ACER2Q5QJU3 275 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 LIPJQ5W064 366 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 ZNF227Q86WZ6 799 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 M1APQ8TC57 530 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 ELP5Q8TE02 316 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 GRHL3Q8TE85 626 aa10.66□□□□□ -0.7
RAPGEF1-207ENST00000481260 TRPC4APQ8TEL6 797 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms