RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ZNF665Q9H7R5 613 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 MAN2C1Q9NTJ4 1040 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.53□□□□□ -1.68
UPF3B-203ENST00000478840 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 ZNF319Q9P2F9 582 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 ZNF624Q9P2J8 865 aaPredicted RBP4.53□□□□□ -1.68
UPF3B-203ENST00000478840 PLA2G4CQ9UP65 541 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 ENTPD4Q9Y227 616 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 RAD54L2Q9Y4B4 1467 aa4.53□□□□□ -1.68
UPF3B-203ENST00000478840 PCSK5Q92824 1860 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 FGD5Q6ZNL6 1462 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 A0A1B0GWJ7 208 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 TMEM89A2RUT3 159 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 P2RY10O00398 339 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 ANGPT2O15123 496 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 CLDN3O15551 220 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 BUB3O43684 328 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 FGF17O60258 216 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 AP2A2O94973 939 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 DIRAS3O95661 229 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 CAVIN2O95810 425 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 EML2O95834 649 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 IGHDP01880 384 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 KRT6BP04259 564 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 RPL35AP18077 110 aaKnown RBP4.52□□□□□ -1.69
UPF3B-203ENST00000478840 PKLRP30613 574 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 KRT6CP48668 564 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 GABPB1Q06547 395 aaPredicted RBP4.52□□□□□ -1.69
UPF3B-203ENST00000478840 DRP2Q13474 957 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 SNX1Q13596 522 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 HEPACAMQ14CZ8 416 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 OR1C1Q15619 314 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 FAM106AQ4KMX7 169 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 LYPLAL1Q5VWZ2 237 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 CES4AQ5XG92 561 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 HIST2H2AA3Q6FI13 130 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 SLC35E4Q6ICL7 350 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 TMEM64Q6YI46 380 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 RFPL4BQ6ZWI9 263 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 COLGALT1Q8NBJ5 622 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 TRIM58Q8NG06 486 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 OR4L1Q8NH43 312 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 ZBTB9Q96C00 473 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 TRIM44Q96DX7 344 aaPredicted RBP4.52□□□□□ -1.69
UPF3B-203ENST00000478840 NECTIN4Q96NY8 510 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 AGPAT1Q99943 283 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 CBWD1Q9BRT8 395 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 EGLN1Q9GZT9 426 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 RWDD1Q9H446 243 aaPredicted RBP4.52□□□□□ -1.69
UPF3B-203ENST00000478840 DBF4Q9UBU7 674 aaPredicted RBP4.52□□□□□ -1.69
UPF3B-203ENST00000478840 COPS7AQ9UBW8 275 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 IL20RAQ9UHF4 553 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 SELENOKQ9Y6D0 94 aa4.52□□□□□ -1.69
UPF3B-203ENST00000478840 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 LMO7DNF2Z398 122 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 SLC1A7O00341 560 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 SYNGR4O95473 234 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 FGF19O95750 216 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 SNHG28P0DPA3 235 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 PRKAR1AP10644 381 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 GLRA1P23415 457 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ADSSP30520 456 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 MAGEA4P43358 317 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 SLC6A8P48029 635 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 GEMP55040 296 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ERVFC1-1P60608 527 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 CSNK2BP67870 215 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 TAB1Q15750 504 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 CARTPTQ16568 116 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 MPPE1Q53F39 396 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 RIPPLY2Q5TAB7 128 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ATP1A1-AS1Q5TC04 95 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 CAPN13Q6MZZ7 669 aaPredicted RBP4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ARSKQ6UWY0 536 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 MEX3BQ6ZN04 569 aaKnown RBP4.51□□□□□ -1.69
UPF3B-203ENST00000478840 TRMT1LQ7Z2T5 733 aaKnown RBP4.51□□□□□ -1.69
UPF3B-203ENST00000478840 AMZ2Q86W34 360 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 LSMEM2Q8N112 164 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ELMOD1Q8N336 334 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 TCEANCQ8N8B7 351 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 GMCL1P1Q8NEA9 526 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 OR5AP2Q8NGF4 316 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 C8orf46Q8TAG6 207 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 P3H4Q92791 437 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 OMA1Q96E52 524 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 MMP28Q9H239 520 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 SLC26A1Q9H2B4 701 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 TMEM231Q9H6L2 316 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 COQ10BQ9H8M1 238 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ZNF334Q9HCZ1 680 aaPredicted RBP4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
UPF3B-203ENST00000478840 C2orf42Q9NWW7 574 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 CLIP2Q9UDT6 1046 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 POMT2Q9UKY4 750 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 PTPRUQ92729 1446 aa4.51□□□□□ -1.69
UPF3B-203ENST00000478840 ZMYM6O95789 1325 aa4.5□□□□□ -1.69
UPF3B-203ENST00000478840 NEDD4P46934 1319 aa4.5□□□□□ -1.69
UPF3B-203ENST00000478840 ADAM12O43184 909 aa4.5□□□□□ -1.69
UPF3B-203ENST00000478840 AK1P00568 194 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms