RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, human

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFF4-208	ENST00000478588	RNASEH1	O60930	286 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	MT-CYB	P00156	380 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	AGT	P01019	485 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TF	P02787	698 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PYGL	P06737	847 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SP1	P08047	785 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	POLR2E	P19388	210 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TCEA1	P23193	301 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CTNNA2	P26232	953 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	OXTR	P30559	389 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CHRNA3	P32297	505 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	RDX	P35241	583 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	NNMT	P40261	264 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PGF	P49763	221 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	GALC	P54803	685 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	RPP30	P78346	268 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	MRPS25	P82663	173 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	GALNT2	Q10471	571 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	IFT88	Q13099	833 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	RIPK1	Q13546	671 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CDH18	Q13634	790 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TRADD	Q15628	312 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	DUOXA1	Q1HG43	343 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TMEM95	Q3KNT9	176 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SLC45A4	Q5BKX6	768 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ANKRD20A8P	Q5CZ79	823 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TNFAIP8L3	Q5GJ75	292 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	RABGAP1L	Q5R372	815 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	STPG1	Q5TH74	334 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TTC19	Q6DKK2	380 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	C11orf63	Q6NUN7	778 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PMF1	Q6P1K2	205 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	LCTL	Q6UWM7	567 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PIGW	Q7Z7B1	504 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TMEM110	Q86TL2	294 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	MFN1	Q8IWA4	741 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CHERP	Q8IWX8	916 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CCDC13	Q8IYE1	715 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	HDDC3	Q8N4P3	179 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ATP6V0D2	Q8N8Y2	350 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	TMEM35B	Q8NCS4	154 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	OR2T3	Q8NH03	318 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	OLIG1	Q8TAK6	271 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	DQX1	Q8TE96	717 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	DUSP19	Q8WTR2	217 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SHC3	Q92529	594 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PRCC	Q92733	491 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	WBP2	Q969T9	261 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SIPA1	Q96FS4	1042 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CHMP6	Q96FZ7	201 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CCDC114	Q96M63	670 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	GABRG3	Q99928	467 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ERP44	Q9BS26	406 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	EDEM2	Q9BV94	578 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	DDX47	Q9H0S4	455 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CSTL1	Q9H114	145 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	STMN4	Q9H169	189 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	NEUROG2	Q9H2A3	272 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	LHX5	Q9H2C1	402 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	POPDC2	Q9HBU9	364 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	BPIFA1	Q9NP55	256 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SLC40A1	Q9NP59	571 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ZDHHC18	Q9NUE0	388 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	ELOVL2	Q9NXB9	296 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	CNOT8	Q9UFF9	292 aa	Known RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SUN2	Q9UH99	717 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PCYOX1	Q9UHG3	505 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	STOML2	Q9UJZ1	356 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	STAP1	Q9ULZ2	295 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	SCML1	Q9UN30	329 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.03	□□□□□ -1.76
AFF4-208	ENST00000478588	VDAC3	Q9Y277	283 aa		4.03	□□□□□ -1.76
AFF4-208	ENST00000478588		A0A1W2PQF6	199 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	TMEM202	A6NGA9	273 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	CCT8L1P	A6NM43	557 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	MEI4	A8MW99	385 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588		F5H5T6	163 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588		H0Y626	953 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	TTI1	O43156	1089 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	TBL1X	O60907	577 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	SOCS5	O75159	536 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	TRUB2	O95900	331 aa	Known RBP	4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	MOCS2	O96007	188 aa	Predicted RBP	4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	F9	P00740	461 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	IGLV3-27	P01718	113 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	CISD3	P0C7P0	127 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	HLA-DOB	P13765	273 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	COX7A2	P14406	83 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	DES	P17661	470 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	GABRG2	P18507	467 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	TNFAIP3	P21580	790 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	BCKDHB	P21953	392 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	CCR1	P32246	355 aa		4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	RPL34	P49207	117 aa	Known RBP	4.02	□□□□□ -1.77
AFF4-208	ENST00000478588	MAGOH	P61326	146 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms