RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TBX21Q9UL17 535 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 TMPRSS11EQ9UL52 423 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CDC14AQ9UNH5 594 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CORO2BQ9UQ03 480 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 NAALAD2Q9Y3Q0 740 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC88CQ9P219 2028 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 A0A1W2PPW3 197 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SH3PXD2BA1X283 911 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ARHGEF33A8MVX0 844 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MAGEB17A8MXT2 336 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 H0YIV9 168 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PSMD11O00231 422 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CLIC1O00299 241 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SLC1A7O00341 560 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BCKDKO14874 412 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PRODHO43272 600 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 NOBOXO60393 691 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DPM1O60762 260 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MRPS14O60783 128 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 FGF18O76093 207 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SLCO2B1O94956 709 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 FKBP9O95302 570 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 BCL10O95999 233 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TIMP1P01033 207 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SEMG1P04279 462 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 FABP3P05413 133 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 GSNP06396 782 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 COX7A2P14406 83 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 IL7RP16871 459 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 GPX2P18283 190 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 POLR2EP19388 210 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 FPR1P21462 350 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 XPAP23025 273 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 IGFBP5P24593 272 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TACR1P25103 407 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CA8P35219 290 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 HPCAL1P37235 193 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 RPL3P39023 403 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 NNMTP40261 264 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CDKN2CP42773 168 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 YAP1P46937 504 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ENTPD1P49961 510 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 NEK2P51955 445 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 IST1P53990 364 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 EPHA5P54756 1037 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 WNT3P56703 355 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PFN3P60673 137 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CXCR4P61073 352 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 WDR5P61964 334 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DEFB103AP81534 67 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SEMG2Q02383 582 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CD47Q08722 323 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ACSM2AQ08AH3 577 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 NFATC3Q12968 1075 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 LAPTM5Q13571 262 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 VEZF1Q14119 521 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ACOX1Q15067 660 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 MOGQ16653 247 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 UGT8Q16880 541 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF284Q2VY69 593 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF829Q3KNS6 432 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SYTL3Q4VX76 610 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ARHGAP15Q53QZ3 475 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SPIN4Q56A73 249 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 XKR6Q5GH73 641 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 C10orf62Q5T681 223 aaPredicted RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 HENMT1Q5T8I9 393 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ANXA8L1Q5VT79 327 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ACSM2BQ68CK6 577 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 XAF1Q6GPH4 301 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 OR2T5Q6IEZ7 315 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZCCHC8Q6NZY4 707 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SERPINA13PQ6UXR4 307 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 RFLNAQ6ZTI6 216 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DPPA4Q7L190 304 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 EIF3MQ7L2H7 374 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 RTL10Q7L3V2 364 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DET1Q7L5Y6 550 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 GPR155Q7Z3F1 870 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PIWIL3Q7Z3Z3 882 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CAMKMTQ7Z624 323 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM179BQ7Z7N9 219 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ANKRD46Q86W74 232 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZNF227Q86WZ6 799 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 HORMAD1Q86X24 394 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 DCP2Q8IU60 420 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 VRK3Q8IV63 474 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 RAVER1Q8IY67 606 aaKnown RBP4.74□□□□□ -1.65
SF3B6-202ENST00000478050 ZZZ3Q8IYH5 903 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 NRSN1Q8IZ57 195 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 SPARTQ8N0X7 666 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 KREMEN2Q8NCW0 462 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 PIK3C3Q8NEB9 887 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 VPS37AQ8NEZ2 397 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 OR2A12Q8NGT7 310 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 OR2T29Q8NH02 315 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
SF3B6-202ENST00000478050 TBC1D15Q8TC07 691 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms