RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 ABHD17BQ5VST6 288 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 RPUSD3Q6P087 351 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 OR4N5Q8IXE1 308 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 KRT78Q8N1N4 520 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TBC1D19Q8N5T2 526 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 ACOT4Q8N9L9 421 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 PHF21BQ96EK2 531 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 VPS50Q96JG6 964 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 RNF32Q9H0A6 362 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TSPAN10Q9H1Z9 355 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 CPSF2Q9P2I0 782 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 OPTCQ9UBM4 332 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 C19orf25Q9UFG5 118 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 ZNF225Q9UK10 706 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 A0A087X1B8 175 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TRAV17A0A0B4J275 112 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 SAGE2PA6NJ88 616 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 GABRR3A8MPY1 467 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TRIM49D1C9J1S8 452 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 HRKO00198 91 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 PLPP1O14494 284 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 RHOXF2BP0C7M4 288 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TSPAN8P19075 237 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 JAK1P23458 1154 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 TPP2P29144 1249 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 DDX39BQ13838 428 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 GOLGA7Q7Z5G4 137 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 ST6GALNAC3Q8NDV1 305 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 PTPMT1Q8WUK0 201 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 ANKRD9Q96BM1 317 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 RHOXF2Q9BQY4 288 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 EFCAB11Q9BUY7 163 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 PNO1Q9NRX1 252 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 XPR1Q9UBH6 696 aa9.55□□□□□ -0.88
LCLAT1-209ENST00000478015 NINQ8N4C6 2090 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 ARHGAP10A1A4S6 786 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 URADA6NGE7 173 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 KLHL41O60662 606 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PRAMEF2O60811 474 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 EEDO75530 441 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 GBAP04062 536 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PCNAP12004 261 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 GFAPP14136 432 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 EPB42P16452 691 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 SERPINB8P50452 374 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 MTTPP55157 894 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 RAB38P57729 211 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PCBP2Q15366 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 OR1C1Q15619 314 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 EXT1Q16394 746 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 FAM83EQ2M2I3 478 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 ZNF766Q5HY98 468 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 C18orf63Q68DL7 685 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 MDGA2Q7Z553 956 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 RPS19BP1Q86WX3 136 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 CHERPQ8IWX8 916 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PTGR2Q8N8N7 351 aaPredicted RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 TTLQ8NG68 377 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 WDR20Q8TBZ3 569 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 SSC4DQ8WTU2 575 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 NR4A3Q92570 626 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 FAR2Q96K12 515 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 CAPS2Q9BXY5 557 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PITHD1Q9GZP4 211 aaPredicted RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 IPPKQ9H8X2 491 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 OLAHQ9NV23 265 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 PPIEQ9UNP9 301 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 OSGIN2Q9Y236 505 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 ATG4BQ9Y4P1 393 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 MED12Q93074 2177 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 CACNA1CQ13936 2221 aa9.54□□□□□ -0.88
LCLAT1-209ENST00000478015 FREM3P0C091 2139 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 PSMD12O00232 456 aaPredicted RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 LRRTM2O43300 516 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 B3GALT2O43825 422 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 TMPRSS11DO60235 418 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 FGF17O60258 216 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 SCELO95171 688 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 HIST1H1TP22492 207 aaPredicted RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 EEF1DP29692 281 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 HNRNPH2P55795 449 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 MLF1P58340 268 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 RPS13P62277 151 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 ILF2Q12905 390 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 TRAF3Q13114 568 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 SLC13A2Q13183 592 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 GTF2H2Q13888 395 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 GLE1Q53GS7 698 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 DEPDC1Q5TB30 811 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 KHDRBS2Q5VWX1 349 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 GTF2H2CQ6P1K8 395 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 MED27Q6P2C8 311 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 TRIM40Q6P9F5 258 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 MYLK4Q86YV6 388 aaPredicted RBP9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 ARMC10Q8N2F6 343 aa9.53□□□□□ -0.88
LCLAT1-209ENST00000478015 B3GNT7Q8NFL0 401 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms