RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SUV39H1O43463 412 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 PDE9AO76083 593 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 PRKD3O94806 890 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 KLHL18O94889 574 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 SLITRK5O94991 958 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 C6orf47O95873 294 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TBX6O95947 436 aaPredicted RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 SERPINA1P01009 418 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CST1P01037 141 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ZNF23P17027 643 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 AK4P27144 223 aaPredicted RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 PSMB5P28074 263 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 NTSP30990 170 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CHI3L1P36222 383 aaPredicted RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 BCL6P41182 706 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ALDH3A2P51648 485 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 MANFP55145 182 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 SKP1P63208 163 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 YBX1P67809 324 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 HBA1P69905 142 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CYP4F2P78329 520 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 MERTKQ12866 999 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 DAG1Q14118 895 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 FZD2Q14332 565 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ZNF385BQ569K4 471 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 NHSL2Q5HYW2 709 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CRB2Q5IJ48 1285 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TTC23Q5W5X9 447 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 KRT80Q6KB66 452 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 UGT2A3Q6UWM9 527 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 Q6ZS52 159 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ABHD13Q7L211 337 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TAF8Q7Z7C8 310 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ASPGQ86U10 573 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 OOSP2Q86WS3 158 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 GKN2Q86XP6 184 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 NRROSQ86YC3 692 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 PTOV1Q86YD1 416 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CBR4Q8N4T8 237 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 DHRSXQ8N5I4 330 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 OR5K1Q8NHB7 308 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 FBXO30Q8TB52 745 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 SFXN5Q8TD22 340 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 NETO1Q8TDF5 533 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 RASSF5Q8WWW0 418 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 TFAP2CQ92754 450 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CLDN23Q96B33 292 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 AURKBQ96GD4 344 aaPredicted RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 RBM4BQ9BQ04 359 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 RBM4Q9BWF3 364 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 TRIM8Q9BZR9 551 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 CLK4Q9HAZ1 481 aaKnown RBP7.55□□□□□ -1.2
VMA21-203ENST00000477649 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 SLC6A13Q9NSD5 602 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 PNPLA3Q9NST1 481 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ACTR10Q9NZ32 417 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 OAZ3Q9UMX2 235 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 ORC6Q9Y5N6 252 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 SPACA6W5XKT8 324 aa7.55□□□□□ -1.2
VMA21-203ENST00000477649 NUMA1Q14980 2115 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 CCDC163A0A0D9SF12 145 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 A0A0J9YY10 115 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 BLACEA4D250 179 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 A6NHS1 94 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 A8MVJ9 347 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 H0Y8X5 98 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 SAP18O00422 153 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 HAT1O14929 419 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 YY2O15391 372 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 ERI3O43414 337 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 LCMT2O60294 686 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 TPST1O60507 370 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 SH3BGRLO75368 114 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 SOX30O94993 753 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 ALBP02768 609 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 CSF2P04141 144 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 FABP3P05413 133 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 SERPIND1P05546 499 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 ARAFP10398 606 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 FOSL2P15408 326 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 UGT2B7P16662 529 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 CKMT2P17540 419 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 CDH2P19022 906 aaPredicted RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 CD72P21854 359 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 MYF6P23409 242 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 ATP5A1P25705 553 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 CD38P28907 300 aa7.54□□□□□ -1.2
VMA21-203ENST00000477649 PEBP1P30086 187 aaKnown RBP7.54□□□□□ -1.2
VMA21-203ENST00000477649 HOXA6P31267 233 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms