RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SMOC1Q9H4F8 434 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 MIEF1Q9NQG6 463 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 EPHA6Q9UF33 1036 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 FBXW2Q9UKT8 454 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 PADI4Q9UM07 663 aa13.71□□□□□ -0.22
COL4A6-206ENST00000477085 PCDH15Q96QU1 1955 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 PROM1O43490 865 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 HTR1EP28566 365 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 CSF2RBP32927 897 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 RPL3P39023 403 aaKnown RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 TSFMP43897 325 aaKnown RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 PCBP4P57723 403 aaKnown RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 RUNX2Q13950 521 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 PDSS2Q86YH6 399 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 MCATQ8IVS2 390 aaKnown RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 CSNK1A1LQ8N752 337 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
COL4A6-206ENST00000477085 ATAD3AQ9NVI7 634 aa13.7□□□□□ -0.22
COL4A6-206ENST00000477085 A0A1W2PS29 197 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 CLIC1O00299 241 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ARPC2O15144 300 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 SIGLEC6O43699 453 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 MED26O95402 600 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ANP32DO95626 131 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 AIFM1O95831 613 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ABCB1P08183 1280 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ENGP17813 658 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 IL1RNP18510 177 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 HOXD12P35452 270 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 FRKP42685 505 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 GSTM5P46439 218 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 MRPS22P82650 360 aaKnown RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 AMZ1Q400G9 498 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 TRIM61Q5EBN2 209 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ZCCHC8Q6NZY4 707 aaKnown RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 AAGABQ6PD74 315 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 SLC23A3Q6PIS1 610 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 DHFR2Q86XF0 187 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 SPPL2CQ8IUH8 684 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 VPS37AQ8NEZ2 397 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 FAM110BQ8TC76 370 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 JADE3Q92613 823 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 STMN2Q93045 179 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 EXOSC8Q96B26 276 aaKnown RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 SLCO4A1Q96BD0 722 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 TCTN2Q96GX1 697 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ECSITQ9BQ95 431 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 GPATCH2Q9NW75 528 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 TAS2R7Q9NYW3 318 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 STX18Q9P2W9 335 aaKnown RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 KLHL3Q9UH77 587 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 CES1P1Q9UKY3 287 aa13.69□□□□□ -0.22
COL4A6-206ENST00000477085 ARID1BQ8NFD5 2236 aaPredicted RBP13.69□□□□□ -0.22
COL4A6-206ENST00000477085 A0A1W2PRB8 838 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 TCRBV3S1A0A5B6 114 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 FAM86C2PA6NEL3 165 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 FKBP6O75344 327 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 C8BP07358 591 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZCCHC18P0CG32 403 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 DRD2P14416 443 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 GPR3P46089 330 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 BNIP2Q12982 314 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZNF750Q32MQ0 723 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 MANEAQ5SRI9 462 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 SPATA24Q86W54 205 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 CEP76Q8TAP6 659 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZFP90Q8TF47 636 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 NRG4Q8WWG1 115 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 CCDC74AQ96AQ1 378 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 C11orf16Q9NQ32 467 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ACTR3BQ9P1U1 418 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 SLC6A14Q9UN76 642 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 PCDHB3Q9Y5E6 796 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 CROCCQ5TZA2 2017 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 GOLGA4Q13439 2230 aaKnown RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 TLCD2A6NGC4 264 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ARHGAP33O14559 1287 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ZSCAN9O15535 394 aaPredicted RBP13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ANPEPP15144 967 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 ALOX12P18054 663 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 GPX2P18283 190 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 MVDP53602 400 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 OLR1P78380 273 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 DUSP2Q05923 314 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 C16orf72Q14CZ0 275 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 PRTGQ2VWP7 1150 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 PERM1Q5SV97 790 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 LCN8Q6JVE9 175 aa13.68□□□□□ -0.22
COL4A6-206ENST00000477085 GUSBP11Q6P575 273 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms