RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TBCDQ9BTW9 1192 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 MS4A8Q9BY19 250 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 ROGDIQ9GZN7 287 aa10.08□□□□□ -0.8
SEC13-214ENST00000476597 PNO1Q9NRX1 252 aaKnown RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 ZNF223Q9UK11 482 aaPredicted RBP10.08□□□□□ -0.8
SEC13-214ENST00000476597 A0A087X1B8 175 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 TRGV8A0A0C4DH27 118 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 TRBV11-1A0A0K0K1C0 115 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SYNDIG1LA6NDD5 238 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SYCE1LA8MT33 242 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SUPT3HB4E1H0 165 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 UBXN8O00124 270 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 NME2P1O60361 137 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SUPT3HO75486 399 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SLC25A12O75746 678 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MYO1DO94832 1006 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MLYCDO95822 493 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 EPB42P16452 691 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 NME2P22392 152 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 PPP2R1BP30154 601 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 CA7P43166 264 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 IRF9Q00978 393 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ALDH6A1Q02252 535 aaKnown RBP10.07□□□□□ -0.8
SEC13-214ENST00000476597 RBPJQ06330 500 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 BMPR2Q13873 1038 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ACAP2Q15057 778 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MAPKAPK3Q16644 382 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 FAM83EQ2M2I3 478 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 TMEM35AQ53FP2 167 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 C8orf74Q6P047 294 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MED27Q6P2C8 311 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ZNF793Q6ZN11 406 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 CHSY3Q70JA7 882 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 RELL1Q8IUW5 271 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SIAH3Q8IW03 269 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ACOT4Q8N9L9 421 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 FAM47BQ8NA70 645 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 OR7G3Q8NG95 312 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
SEC13-214ENST00000476597 VMP1Q96GC9 406 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 FRMD6Q96NE9 622 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 GPR78Q96P69 363 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 KCNC2Q96PR1 638 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 CSF3RQ99062 836 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 MAPKAP1Q9BPZ7 522 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 FUT8Q9BYC5 575 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ALOXE3Q9BYJ1 711 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 COPS7BQ9H9Q2 264 aaPredicted RBP10.07□□□□□ -0.8
SEC13-214ENST00000476597 LYRM4Q9HD34 91 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 SNX15Q9NRS6 342 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 NINJ2Q9NZG7 142 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 OPTCQ9UBM4 332 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 VTI1BQ9UEU0 232 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 FBXW2Q9UKT8 454 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 ZNF835Q9Y2P0 537 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 TACC2O95359 2948 aa10.07□□□□□ -0.8
SEC13-214ENST00000476597 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 SCN2AQ99250 2005 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 APCP25054 2843 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 NPIPA5E9PKD4 350 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 RTCAO00442 366 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 CCL21O00585 134 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 FCHO1O14526 889 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ASNA1O43681 348 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 KLK8O60259 260 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 PRKNO60260 465 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 SLC19A2O60779 497 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ZFAND5O76080 213 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 URI1O94763 535 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 SCELO95171 688 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 KLHL2O95198 593 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TGFB1P01137 390 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ATP5A1P25705 553 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 SERPINB1P30740 379 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 PHBP35232 272 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 NAA30Q147X3 362 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 ELAVL1Q15717 326 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 WHAMMP3Q1A5X7 153 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 AP5B1Q2VPB7 878 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 DEPDC1Q5TB30 811 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 SP5Q6BEB4 398 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 GRHL2Q6ISB3 625 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 CLNKQ7Z7G1 428 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 SPPL2CQ8IUH8 684 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 SLC34A3Q8N130 599 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TMEM132CQ8N3T6 1108 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 MMGT1Q8N4V1 131 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TEX9Q8N6V9 391 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 FAM98AQ8NCA5 519 aaKnown RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 PTPMT1Q8WUK0 201 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 ITLN2Q8WWU7 325 aaPredicted RBP10.06□□□□□ -0.8
SEC13-214ENST00000476597 NCLNQ969V3 563 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 TMEM125Q96AQ2 219 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 CMTM7Q96FZ5 175 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ACSS3Q9H6R3 686 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ADAP2Q9NPF8 381 aa10.06□□□□□ -0.8
SEC13-214ENST00000476597 ADGRE2Q9UHX3 823 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms