RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 HSCBQ8IWL3 235 aa5□□□□□ -1.61
SMC5-203ENST00000475540 SUMF1Q8NBK3 374 aa5□□□□□ -1.61
SMC5-203ENST00000475540 TAAR6Q96RI8 345 aa5□□□□□ -1.61
SMC5-203ENST00000475540 CCDC28BQ9BUN5 200 aa5□□□□□ -1.61
SMC5-203ENST00000475540 XPO4Q9C0E2 1151 aaKnown RBP5□□□□□ -1.61
SMC5-203ENST00000475540 WDR41Q9HAD4 459 aa5□□□□□ -1.61
SMC5-203ENST00000475540 EPS15L1Q9UBC2 864 aa5□□□□□ -1.61
SMC5-203ENST00000475540 TRGV8A0A0C4DH27 118 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 C2orf92A0A1B0GVN3 265 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 TRIM49BA6NDI0 452 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ZNF732B4DXR9 585 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 SIX3O95343 332 aaPredicted RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 ZFYP08048 801 aaPredicted RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 MELTFP08582 738 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 FAM200BP0CF97 657 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 HLA-DPA1P20036 260 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 SOAT1P35610 550 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 KHKP50053 298 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 RPP38P78345 283 aaKnown RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 ACY1Q03154 408 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 KNOP1Q1ED39 458 aaKnown RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 ZNF674Q2M3X9 581 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 DNAJC21Q5F1R6 531 aaKnown RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 C9orf66Q5T8R8 295 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ALKBH5Q6P6C2 394 aaKnown RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 CNSTQ6PJW8 725 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 PIWIL3Q7Z3Z3 882 aaKnown RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 CARM1Q86X55 608 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 C10orf53Q8N6V4 93 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 SGF29Q96ES7 293 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ERO1AQ96HE7 468 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ALKBH3Q96Q83 286 aaPredicted RBP4.99□□□□□ -1.61
SMC5-203ENST00000475540 INTS14Q96SY0 518 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ODF2LQ9ULJ1 636 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 ADAMTS9Q9P2N4 1935 aa4.99□□□□□ -1.61
SMC5-203ENST00000475540 A0A0U1RQK1 487 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 ZNF320A2RRD8 509 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 A8MU76 341 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 PHF1O43189 567 aaPredicted RBP4.98□□□□□ -1.61
SMC5-203ENST00000475540 SCO2O43819 266 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 SH3BGRLO75368 114 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 NPBWR1P48145 328 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 MORF4L2Q15014 288 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 ZNF770Q6IQ21 691 aaPredicted RBP4.98□□□□□ -1.61
SMC5-203ENST00000475540 CAVIN1Q6NZI2 390 aaKnown RBP4.98□□□□□ -1.61
SMC5-203ENST00000475540 C17orf107Q6ZR85 190 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 MCM10Q7L590 875 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 RPAINQ86UA6 219 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 FGFRL1Q8N441 504 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 TMEM99Q8N816 258 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 PTP4A1Q93096 173 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 PRMT1Q99873 361 aaKnown RBP4.98□□□□□ -1.61
SMC5-203ENST00000475540 TRIM7Q9C029 511 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 MOSPD1Q9UJG1 213 aa4.98□□□□□ -1.61
SMC5-203ENST00000475540 TRAV34A0A0B4J273 112 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 ILVBLA1L0T0 632 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 ZNF840PA6NDX5 716 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 PHOX2AO14813 284 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 TXNL1O43396 289 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 SELENOFO60613 162 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 ANGPTL1O95841 491 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 IGKV3-15P01624 115 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 RLN1P04808 185 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 EVCP57679 992 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 YWHAHQ04917 246 aaPredicted RBP4.97□□□□□ -1.61
SMC5-203ENST00000475540 SCN1BQ07699 218 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 C2orf76Q3KRA6 126 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 REG3GQ6UW15 175 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 CD99L2Q8TCZ2 262 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 DNASE1L2Q92874 299 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 NABP1Q96AH0 204 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 CCDC114Q96M63 670 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 PINK1Q9BXM7 581 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 FUT8Q9BYC5 575 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 MTIF3Q9H2K0 278 aaKnown RBP4.97□□□□□ -1.61
SMC5-203ENST00000475540 MMADHCQ9H3L0 296 aaPredicted RBP4.97□□□□□ -1.61
SMC5-203ENST00000475540 SP140LQ9H930 580 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 TMCC3Q9ULS5 477 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 POMT1Q9Y6A1 747 aa4.97□□□□□ -1.61
SMC5-203ENST00000475540 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 K7EQG2 157 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 DDX39AO00148 427 aaKnown RBP4.96□□□□□ -1.62
SMC5-203ENST00000475540 ACSL4O60488 711 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 GRAP2O75791 330 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 MT-ND1P03886 318 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 OR3A1P47881 315 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 FOLH1Q04609 750 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 SMU1Q2TAY7 513 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 CASC4Q6P4E1 433 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 MSANTD1Q6ZTZ1 278 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 CATSPER4Q7RTX7 472 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 ADCK1Q86TW2 530 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 ELMOD1Q8N336 334 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 SLC43A2Q8N370 569 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 OR13C5Q8NGS8 318 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 SMPDL3AQ92484 453 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 CABS1Q96KC9 395 aa4.96□□□□□ -1.62
SMC5-203ENST00000475540 TNFRSF13CQ96RJ3 184 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms