RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GCNT7Q6ZNI0 430 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 KCTD8Q6ZWB6 473 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 SYT13Q7L8C5 426 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 MRPL21Q7Z2W9 205 aaKnown RBP3.34□□□□□ -1.88
UBR3-208ENST00000474426 TECPR1Q7Z6L1 1165 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ZNF410Q86VK4 478 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ZNF34Q8IZ26 560 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 RBFAQ8N0V3 343 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 KIF2BQ8N4N8 673 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 CLEC1AQ8NC01 280 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 OR9K2Q8NGE7 335 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 OR52B4Q8NGK2 314 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 SP7Q8TDD2 431 aaPredicted RBP3.34□□□□□ -1.88
UBR3-208ENST00000474426 EID2BQ96D98 161 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 DYDC2Q96IM9 177 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 INSM2Q96T92 566 aaPredicted RBP3.34□□□□□ -1.88
UBR3-208ENST00000474426 ADAM2Q99965 735 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 FUZQ9BT04 418 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 GGACTQ9BVM4 153 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 S1PR5Q9H228 398 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 CCDC134Q9H6E4 229 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 LDAHQ9H6V9 325 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 FGFR1OP2Q9NVK5 253 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 DZANK1Q9NVP4 752 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 KCNK4Q9NYG8 393 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ANKFY1Q9P2R3 1169 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ABCG2Q9UNQ0 655 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 CDYLQ9Y232 598 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ZDHHC9Q9Y397 364 aa3.34□□□□□ -1.88
UBR3-208ENST00000474426 ARAP1Q96P48 1450 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 RIMS1Q86UR5 1692 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 UACAQ9BZF9 1416 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TMEM265A0A087WTH1 108 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 KDM4FA0A1W2PPD8 638 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC35F4A4IF30 521 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 KPNA4O00629 521 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 DLGAP1O14490 977 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SIVA1O15304 175 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 OGG1O15527 345 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SRPX2O60687 465 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 TRIM13O60858 407 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LEFTY1O75610 366 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CREG1O75629 220 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 F12P00748 615 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 GBAP04062 536 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 UGT2B4P06133 528 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 COX4I1P13073 169 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 UBA1P22314 1058 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 ITPKAP23677 461 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ECHS1P30084 290 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CEACAM8P31997 349 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 RBP2P50120 134 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 BCAT1P54687 386 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LSM6P62312 80 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 IL5RAQ01344 420 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 STX4Q12846 297 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ACOX1Q15067 660 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DEFB115Q30KQ5 88 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 C18orf21Q32NC0 220 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 NDUFAF6Q330K2 333 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 RUNDC3AQ59EK9 446 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 PPM1LQ5SGD2 360 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LRRN1Q6UXK5 716 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ERASQ7Z444 233 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TRMT10AQ8TBZ6 339 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 BLOC1S5Q8TDH9 187 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GRHL3Q8TE85 626 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 NRG4Q8WWG1 115 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GTF2H4Q92759 462 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GCDHQ92947 438 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLCO2A1Q92959 643 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SAT2Q96F10 170 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 MSLNLQ96KJ4 702 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GTPBP2Q9BX10 602 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 AMNQ9BXJ7 453 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ROGDIQ9GZN7 287 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SHARPINQ9H0F6 387 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 SLC32A1Q9H598 525 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM86C1Q9NVL1 165 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 RASD1Q9Y272 281 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FANCD2Q9BXW9 1451 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 AKAP11Q9UKA4 1901 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LINC00862A6NCI5 91 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 TMEM191CA6NGB0 347 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 MAGEB17A8MXT2 336 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM25AB3EWG3 89 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM25CB3EWG5 89 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 FAM25GB3EWG6 89 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CDC7O00311 574 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ADAM12O43184 909 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 LCMT2O60294 686 aaKnown RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 OR10H2O60403 315 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 DLX3O60479 287 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 GAS7O60861 476 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 UGT2B11O75310 529 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CILPO75339 1184 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 STX11O75558 287 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ZIC2O95409 532 aaPredicted RBP3.33□□□□□ -1.88
UBR3-208ENST00000474426 TOP3BO95985 862 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms