RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 VWA8A3KMH1 1905 aa10.28□□□□□ -0.76
LSS-208ENST00000474319 TRBV4-1A0A0J9YWV2 114 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 PRR23AA6NEV1 266 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 C5orf58C9J3I9 102 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 SCN2BO60939 215 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 GPX5O75715 221 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 CH25HO95992 272 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 GSTM1P09488 218 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 SRCP12931 536 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 JUNDP17535 347 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 MAGEA2P43356 314 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 RECQLP46063 649 aaPredicted RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 SNRPD2P62316 118 aaKnown RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 SRSF11Q05519 484 aaKnown RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 ARSIQ5FYB1 569 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 CLEC12AQ5QGZ9 265 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 TMEM220Q6QAJ8 160 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 DEPDC4Q8N2C3 294 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 GHDCQ8N2G8 530 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 SYT14Q8NB59 555 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 ZNF486Q96H40 463 aaPredicted RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 FYTTD1Q96QD9 318 aaKnown RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 CITED4Q96RK1 184 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 WFDC6Q9BQY6 131 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 SLC12A9Q9BXP2 914 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 GPATCH2Q9NW75 528 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 PAQR5Q9NXK6 330 aaPredicted RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 TRPC4Q9UBN4 977 aa10.27□□□□□ -0.76
LSS-208ENST00000474319 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 WBP11Q9Y2W2 641 aaKnown RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 MRPS23Q9Y3D9 190 aaKnown RBP10.27□□□□□ -0.76
LSS-208ENST00000474319 GSAPA4D1B5 854 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 KPNA3O00505 521 aaPredicted RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 SCAMP2O15127 329 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 GUCY1B2O75343 617 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 IFI30P13284 250 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 TNFSF8P32971 234 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 GGT2P36268 569 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 RPS19P39019 145 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 VIPR2P41587 438 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 PTPN5P54829 565 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 DEFA1P59665 94 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 DEFA3P59666 94 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 IFITM2Q01629 132 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 MLLT1Q03111 559 aaPredicted RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 SLAMF1Q13291 335 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 IFI44LQ53G44 452 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 RNASE12Q5GAN4 147 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 TMEM240Q5SV17 173 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 PAMR1Q6UXH9 720 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 TPRG1Q6ZUI0 275 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 SLC46A3Q7Z3Q1 461 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 DDX53Q86TM3 631 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 DCAF4L2Q8NA75 395 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 KBTBD8Q8NFY9 601 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 EXOSC8Q96B26 276 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 PPCDCQ96CD2 204 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 TRMT61AQ96FX7 289 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 MMP27Q9H306 513 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 NUFIP1Q9UHK0 495 aaKnown RBP10.27□□□□□ -0.77
LSS-208ENST00000474319 NAALAD2Q9Y3Q0 740 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 JUPP14923 745 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 ZNF24P17028 368 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 GPX2P18283 190 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 CDK6Q00534 326 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 BAK1Q16611 211 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 SNAP47Q5SQN1 464 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 GCNT6Q5T4J0 391 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 FAM131AQ6UXB0 335 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 CHST9Q7L1S5 443 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 HRASLS5Q96KN8 279 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 DEPDC7Q96QD5 511 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 SPOCK3Q9BQ16 436 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 ZNF221Q9UK13 617 aa10.27□□□□□ -0.77
LSS-208ENST00000474319 KCNE1BA0A087WTH5 132 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 GRXCR2A6NFK2 248 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 FRS3O43559 492 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 TLX2O43763 284 aaPredicted RBP10.26□□□□□ -0.77
LSS-208ENST00000474319 CDRT1O95170 752 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 PPM1AP35813 382 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 CCR2P41597 374 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 WASP42768 502 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 SNRPD1P62314 119 aaKnown RBP10.26□□□□□ -0.77
LSS-208ENST00000474319 MAP4K2Q12851 820 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 GRIN2CQ14957 1233 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 TBRG1Q3YBR2 411 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 VASH1Q7L8A9 365 aaPredicted RBP10.26□□□□□ -0.77
LSS-208ENST00000474319 LRRC70Q7Z2Q7 622 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 COMMD6Q7Z4G1 85 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 ADAMTS19Q8TE59 1207 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
LSS-208ENST00000474319 UCN3Q969E3 161 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 TESCQ96BS2 214 aa10.26□□□□□ -0.77
LSS-208ENST00000474319 POLR2J2Q9GZM3 115 aaKnown RBP10.26□□□□□ -0.77
LSS-208ENST00000474319 KCNK12Q9HB15 430 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms