RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TICAM1Q8IUC6 712 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 COL26A1Q96A83 441 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 VPS33AQ96AX1 596 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 MVB12AQ96EY5 273 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 ZBED6CLQ96FA7 236 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 EGLN2Q96KS0 407 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 GBP5Q96PP8 586 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 TEFMQ96QE5 360 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 PANX1Q96RD7 426 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 NPAS2Q99743 824 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 SH3GL1Q99961 368 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 BTBD10Q9BSF8 475 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 C1orf21Q9H246 121 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 CLK4Q9HAZ1 481 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 RXFP3Q9NSD7 469 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 EHD3Q9NZN3 535 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 SEMA5BQ9P283 1151 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 CROTQ9UKG9 612 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 PCDHGA1Q9Y5H4 931 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 RP1P56715 2156 aa9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 ARID1BQ8NFD5 2236 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A0A6YYC8 382 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A1B0GX78 115 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 CFAP73A6NFT4 308 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 H0YIG0 161 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 I3L1I5 382 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SGK494L7N484 410 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 DSCR3O14972 297 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 POLR1CO15160 346 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 TMPRSS11DO60235 418 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 RDH16O75452 317 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SCRG1O75711 98 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 DNAJC8O75937 253 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SCELO95171 688 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 CPSF4O95639 269 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 FURINP09958 794 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 FOLR1P15328 257 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 CAPN3P20807 821 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 FBLP22087 321 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SOAT1P35610 550 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 DGKQP52824 942 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 MANFP55145 182 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 RAB38P57729 211 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 RAB15P59190 212 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 IL11RAQ14626 422 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 TRMT5Q32P41 509 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SPDYE7PQ495Y7 208 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 ARHGAP40Q5TG30 622 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR4F3Q6IEY1 312 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM71E1Q6IPT2 247 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 ANGPTL8Q6UXH0 198 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF793Q6ZN11 406 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 BNC2Q6ZN30 1099 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 UBE3DQ7Z6J8 389 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SLITRK4Q8IW52 837 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 DEFB107AQ8IZN7 70 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 PGAM4Q8N0Y7 254 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 FAM47BQ8NA70 645 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 C7orf57Q8NEG2 295 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR7A2PQ8NGA2 310 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR8J2Q8NGG1 315 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR4A15Q8NGL6 344 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR9A4Q8NGU2 314 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 OR1L3Q8NH93 324 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 NETO1Q8TDF5 533 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 EXOSC8Q96B26 276 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 C11orf24Q96F05 449 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 HOPXQ9BPY8 73 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SPRTNQ9H040 489 aaPredicted RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 LRMDAQ9H2I8 198 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 RPF2Q9H7B2 306 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 PRDM7Q9NQW5 492 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 ADA2Q9NZK5 511 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 PDP2Q9P2J9 529 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 ATP6V1HQ9UI12 483 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 UTS2RQ9UKP6 389 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 DAPP1Q9UN19 280 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 VPS4AQ9UN37 437 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 CORO2BQ9UQ03 480 aa9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-202ENST00000474048 PRSS51A0A1B0GVH4 220 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 A0A1W2PRB8 838 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 FITM1A5D6W6 292 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 EVPLLA8MZ36 301 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PROB1E7EW31 1015 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 RNASET2O00584 256 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ANKRD28O15084 1053 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ZNF749O43361 778 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 GDF9O60383 454 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ERN1O75460 977 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 GMNNO75496 209 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 AIFM1O95831 613 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 ABCB1P08183 1280 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 AGXTP21549 392 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PPIBP23284 216 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 CCKBRP32239 447 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 CHI3L1P36222 383 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 PGM1P36871 562 aa9.72□□□□□ -0.85
PRPF38A-202ENST00000474048 LIMK1P53667 647 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms