RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SERPIND1P05546 499 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CELA3AP09093 270 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SMIM10L1P0DMW3 83 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 RNH1P13489 461 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 NPPBP16860 134 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ENDOUP21128 410 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CCND1P24385 295 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PPP2R1BP30154 601 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 UQCRC1P31930 480 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SOX3P41225 446 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SCTRP47872 440 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ASCL1P50553 236 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CCR8P51685 355 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 BASP1P80723 227 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PPP2R2BQ00005 443 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CTBP1Q13363 440 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SNX1Q13596 522 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 KEAP1Q14145 624 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 DAZAP2Q15038 168 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXL19-AS1Q494R0 122 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 XKR6Q5GH73 641 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 NDUFAF5Q5TEU4 345 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 NIPAL1Q6NVV3 410 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 LCTLQ6UWM7 567 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 IL20RBQ6UXL0 311 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 GK5Q6ZS86 529 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ABHD13Q7L211 337 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC13A5Q86YT5 568 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 DENND6AQ8IWF6 608 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SCUBE1Q8IWY4 988 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SYCE1Q8N0S2 351 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 FAM109AQ8N4B1 249 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ANKRD53Q8N9V6 530 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ACRBPQ8NEB7 543 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 NT5CQ8TCD5 201 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 UTP15Q8TED0 518 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ASB15Q8WXK1 588 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 NCLNQ969V3 563 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF837Q96EG3 531 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 VMP1Q96GC9 406 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SMIM10Q96HG1 83 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 HES6Q96HZ4 224 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PDLIM2Q96JY6 352 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 OR4K3Q96R72 315 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 RASL10BQ96S79 203 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 GPR21Q99679 349 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 HAUS8Q9BT25 410 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 AARSD1Q9BTE6 412 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CNPPD1Q9BV87 410 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 GRIP2Q9C0E4 1043 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 AICDAQ9GZX7 198 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SPNS1Q9H2V7 528 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PLEKHF2Q9H8W4 249 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 LIN28AQ9H9Z2 209 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 CLK4Q9HAZ1 481 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 IL1RL2Q9HB29 575 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 FBXO6Q9NRD1 293 aaPredicted RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 HPF1Q9NWY4 346 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 TRMT1Q9NXH9 659 aaKnown RBP4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 SPRR3Q9UBC9 169 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 MYOTQ9UBF9 498 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ADAMTS6Q9UKP5 1117 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 ACAD8Q9UKU7 415 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 PDE10AQ9Y233 779 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 DYRK1BQ9Y463 629 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 MMACHCQ9Y4U1 282 aa4.75□□□□□ -1.65
SNRNP40-204ENST00000474025 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ATP6AP2A0A1C7CYW4 349 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CTAGE9A4FU28 777 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 WWP2O00308 870 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HCN1O60741 890 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ZNF354AO60765 605 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 AVILO75366 819 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 ATP6AP2O75787 350 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 IPO7O95373 1038 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 C8GP07360 202 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CCL3P10147 92 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 GABRA1P14867 456 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 PAMP19021 973 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CD53P19397 219 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TPSB2P20231 275 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CNR1P21554 472 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 BMP5P22003 454 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TACR1P25103 407 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 AHRP35869 848 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HNF4AP41235 474 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SLC1A2P43004 574 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 DNASE1L1P49184 302 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 MAN2A2P49641 1150 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HNRNPFP52597 415 aaKnown RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 HK2P52789 917 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 RAB8AP61006 207 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 DCAF7P61962 342 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 CDK16Q00536 496 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 REEP5Q00765 189 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TIAL1Q01085 375 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SP140Q13342 867 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 SIX1Q15475 284 aaPredicted RBP4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 TPSAB1Q15661 275 aa4.74□□□□□ -1.65
SNRNP40-204ENST00000474025 PHKG1Q16816 387 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms