RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 A0A1W2PS29 197 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 K7ESF4 209 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 KIR2DS3K7RE56 304 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 UPK1AO00322 258 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 PDPK1O15530 556 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 LDLRP01130 860 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 IST1P53990 364 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 HSPB3Q12988 150 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 KIR2DS5Q14953 304 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 C18orf63Q68DL7 685 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 FIGLAQ6QHK4 219 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 TBPL2Q6SJ96 375 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 SPESP1Q6UW49 350 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 RNF130Q86XS8 419 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 SHISA5Q8N114 240 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 OR52E4Q8NGH9 312 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 KCNC2Q96PR1 638 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 OR2A5Q96R48 311 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 FBXW2Q9UKT8 454 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 ASB4Q9Y574 426 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 MAGED1Q9Y5V3 778 aaPredicted RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 A0A1W2PR48 441 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 TLR4O00206 839 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 DLGAP1O14490 977 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 PGRMC2O15173 223 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 ZNF682O95780 498 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 CSF2P04141 144 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 ZNF888P0CJ79 500 aaPredicted RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 FCGR1AP12314 374 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 RPS15AP62244 130 aaKnown RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 RPS26P62854 115 aaKnown RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 ZNF750Q32MQ0 723 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 TMEM214Q6NUQ4 689 aaKnown RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 TMEM26Q6ZUK4 368 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 VTCN1Q7Z7D3 282 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 TBC1D19Q8N5T2 526 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 CADM4Q8NFZ8 388 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 LMX1AQ8TE12 382 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 GATA6Q92908 595 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 ZNF597Q96LX8 424 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 UBAP1Q9NZ09 502 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 CNOT11Q9UKZ1 510 aaKnown RBP17.09■□□□□ 0.33
VARS2-206ENST00000473916 GMEB1Q9Y692 573 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 PCDH15Q96QU1 1955 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 CLOCKO15516 846 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 TNFSF14O43557 240 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 B4GALT2O60909 372 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 SDC3O75056 442 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 NME1P15531 152 aaKnown RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 CHI3L1P36222 383 aaPredicted RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 CDK9P50750 372 aaKnown RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 BLKP51451 505 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 PCBP4P57723 403 aaKnown RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 LRRC74AQ0VAA2 488 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 PPP1R8Q12972 351 aaKnown RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 MED21Q13503 144 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 MRM1Q6IN84 353 aaKnown RBP17.08■□□□□ 0.33
VARS2-206ENST00000473916 TRIM40Q6P9F5 258 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 TSSK4Q6SA08 328 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 ASPGQ86U10 573 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 C1orf216Q8TAB5 229 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 ZCCHC10Q8TBK6 192 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 UGT2B28Q9BY64 529 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 VCXQ9H320 206 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 PILRAQ9UKJ1 303 aa17.08■□□□□ 0.33
VARS2-206ENST00000473916 C2orf74A8MZ97 194 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 EI24O14681 340 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 HCRTR1O43613 425 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 DNAJB6O75190 326 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 TNFRSF21O75509 655 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 GCM2O75603 506 aaPredicted RBP17.08■□□□□ 0.32
VARS2-206ENST00000473916 CSNK1EP49674 416 aaKnown RBP17.08■□□□□ 0.32
VARS2-206ENST00000473916 MANFP55145 182 aaKnown RBP17.08■□□□□ 0.32
VARS2-206ENST00000473916 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
VARS2-206ENST00000473916 BTN3A2P78410 334 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 DUSP2Q05923 314 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 SLC9A5Q14940 896 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 PPP4R4Q6NUP7 873 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 GJD3Q8N144 294 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 CNBD2Q96M20 576 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 SIRT3Q9NTG7 399 aaPredicted RBP17.08■□□□□ 0.32
VARS2-206ENST00000473916 TMEM74BQ9NUR3 256 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 SIT1Q9Y3P8 196 aa17.08■□□□□ 0.32
VARS2-206ENST00000473916 TMEM131Q92545 1883 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 SPTBP11277 2137 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 RNF103-CHMP3A0A140T963 221 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 TBX19O60806 448 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 AIFM1O95831 613 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 C9P02748 559 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 ALPPL2P10696 532 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 PPIBP23284 216 aaKnown RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 GSTM2P28161 218 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 KDELR2P33947 212 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 GTF2A1P52655 376 aaPredicted RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 PDK3Q15120 406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms