RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SLC25A19Q9HC21 320 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ZSCAN32Q9NX65 697 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ERVK13-1Q9NX77 482 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TAS2R7Q9NYW3 318 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NFKBIL1Q9UBC1 381 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 KCND3Q9UK17 655 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 OGDHLQ9ULD0 1010 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TBC1D24Q9ULP9 559 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DIMT1Q9UNQ2 313 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 OR51B4Q9Y5P0 310 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MAU2Q9Y6X3 613 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TRBC2A0A5B9 178 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MYADML2A6NDP7 307 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GUCY1B2O75343 617 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PSIP1O75475 530 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 ASGR1P07306 291 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CXCR2P25025 360 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PKLRP30613 574 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 RCVRNP35243 200 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 XKP51811 444 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PFN3P60673 137 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 WDR5P61964 334 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 DDX39BQ13838 428 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 DOC2AQ14183 400 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 C3orf38Q5JPI3 329 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLC35F1Q5T1Q4 408 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MFSD4BQ5TF39 518 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 HACD4Q5VWC8 232 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 C9orf131Q5VYM1 1079 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MBOAT1Q6ZNC8 495 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GET4Q7L5D6 327 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 CPXM2Q8N436 756 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NFKBIDQ8NI38 313 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ZFAND1Q8TCF1 268 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 UBE2FQ969M7 185 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 EID2BQ96D98 161 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DIRAS2Q96HU8 199 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MCCC1Q96RQ3 725 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 FAM83DQ9H4H8 585 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SUV39H2Q9H5I1 410 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TRIM45Q9H8W5 580 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 NMNAT1Q9HAN9 279 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 NEUROD4Q9HD90 331 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 AMBNQ9NP70 447 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ACER3Q9NUN7 267 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLC25A13Q9UJS0 675 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CFAP20Q9Y6A4 193 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 CTDSP2O14595 271 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PRKYO43930 277 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLC19A2O60779 497 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GPX5O75715 221 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SLCO2B1O94956 709 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GJB5O95377 273 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 POP4O95707 220 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 M6PRP20645 277 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MZF1P28698 734 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 CNR2P34972 360 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TGFBR1P36897 503 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 MAP2K3P46734 347 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DGKGP49619 791 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 NKX2-5P52952 324 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 SMAD3P84022 425 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 DAB2P98082 770 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 PDE7AQ13946 482 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 TRIM71Q2Q1W2 868 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 PYDC2Q56P42 97 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 C12orf73Q69YU5 71 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 AGTRAPQ6RW13 159 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CRTC1Q6UUV9 634 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CREB3L2Q70SY1 520 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 RNF180Q86T96 592 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ACOT12Q8WYK0 555 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 UFD1Q92890 307 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 C11orf24Q96F05 449 aaPredicted RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 NIPSNAP1Q9BPW8 284 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 GTPBP2Q9BX10 602 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 POLDIP3Q9BY77 421 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 TM6SF2Q9BZW4 377 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 ZCCHC2Q9C0B9 1178 aaKnown RBP5.86□□□□□ -1.47
HERC4-209ENST00000473533 ITM2CQ9NQX7 267 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 SNTG1Q9NSN8 517 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 C14orf119Q9NWQ9 140 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 HCN2Q9UL51 889 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 V9GYH0 126 aa5.86□□□□□ -1.47
HERC4-209ENST00000473533 DSPPQ9NZW4 1301 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 A0A1W2PQ09 198 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PIPSLA2A3N6 862 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 F8W810 466 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 SMAD6O43541 496 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 TBX19O60806 448 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 ATG13O75143 517 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 C1QBP02746 253 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 KLKB1P03952 638 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 H1F0P07305 194 aaKnown RBP5.85□□□□□ -1.47
HERC4-209ENST00000473533 CHRNB1P11230 501 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 CPEP16870 476 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 MAGP20916 626 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 AQP1P29972 269 aa5.85□□□□□ -1.47
HERC4-209ENST00000473533 PPP2R1BP30154 601 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms