RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PCDHGA11Q9Y5H2 935 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 NBASA2RRP1 2371 aa12.35□□□□□ -0.43
TPM3-216ENST00000473036 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 IGHV3-20A0A0C4DH32 117 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 A0A1W2PQ72 361 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CEACAM4O75871 244 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 SCELO95171 688 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 PDYNP01213 254 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 HEXBP07686 556 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 FHP07954 510 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CHN1P15882 459 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 ATP5A1P25705 553 aaKnown RBP12.34□□□□□ -0.43
TPM3-216ENST00000473036 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 BSGP35613 385 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CD97P48960 835 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 LIM2P55344 173 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 EEF1A2Q05639 463 aaKnown RBP12.34□□□□□ -0.43
TPM3-216ENST00000473036 PCOLCEQ15113 449 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 DCAF10Q5QP82 559 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 FRG2Q64ET8 278 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 MED25Q71SY5 747 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CDYL2Q8N8U2 506 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CCDC63Q8NA47 563 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 FAM76AQ8TAV0 307 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 TBC1D20Q96BZ9 403 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CMTM7Q96FZ5 175 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 ABHD17AQ96GS6 310 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 FRG2BQ96QU4 278 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 HBEGFQ99075 208 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 MAPKAP1Q9BPZ7 522 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 GATA5Q9BWX5 397 aaPredicted RBP12.34□□□□□ -0.43
TPM3-216ENST00000473036 C14orf105Q9NVL8 296 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
TPM3-216ENST00000473036 CNTRLQ7Z7A1 2325 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 SPTBN1Q01082 2364 aaKnown RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 IGHV1-45A0A0A0MS14 117 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 URADA6NGE7 173 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 FOXE1O00358 373 aaPredicted RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 CYR61O00622 381 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 B4GALT2O60909 372 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 EEDO75530 441 aaKnown RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 OTCP00480 354 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 CCL11P51671 97 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 LCP2Q13094 533 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 RAPSNQ13702 412 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 MINDY4Q4G0A6 757 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 C4orf17Q53FE4 359 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 SGO1Q5FBB7 561 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 LIPMQ5VYY2 423 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 TRIM40Q6P9F5 258 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 FRMD7Q6ZUT3 714 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 GPRIN3Q6ZVF9 776 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 ANKRD37Q7Z713 158 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 PTRH1Q86Y79 214 aaKnown RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 KIRREL3Q8IZU9 778 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 OR6Y1Q8NGX8 325 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 UCN3Q969E3 161 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 KCNC2Q96PR1 638 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 NUDT9Q9BW91 350 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 ZBTB20Q9HC78 741 aaPredicted RBP12.33□□□□□ -0.44
TPM3-216ENST00000473036 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 NECTIN3Q9NQS3 549 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 PSD3Q9NYI0 1048 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 PPT2Q9UMR5 302 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 TIMM22Q9Y584 194 aa12.33□□□□□ -0.44
TPM3-216ENST00000473036 IGKV3D-11A0A0A0MRZ8 115 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 A6NL46 340 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 WASHC1A8K0Z3 465 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 MANBAO00462 879 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 TMPRSS11DO60235 418 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 PRKRAO75569 313 aaKnown RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 IGHEP01854 428 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 MAOAP21397 527 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 HIST1H1TP22492 207 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 PTX3P26022 381 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 SERPINB3P29508 390 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 SERPINB1P30740 379 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 MTTPP55157 894 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 TBL3Q12788 808 aaKnown RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 CUL3Q13618 768 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 TMEM35AQ53FP2 167 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 OR4C11Q6IEV9 310 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 ZCCHC23Q6ZST2 131 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 TMEM102Q8N9M5 508 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 FAM47BQ8NA70 645 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 DYDC1Q8WWB3 177 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 NACC2Q96BF6 587 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms