RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 FPR1P21462 350 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 OPRM1P35372 400 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 RGS4P49798 205 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 KCNJ2P63252 427 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 SP140Q13342 867 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 RCN2Q14257 317 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 POU4F3Q15319 338 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 XKR6Q5GH73 641 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 ARMC3Q5W041 872 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 KIAA0930Q6ICG6 404 aaPredicted RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 NEPROQ6NW34 567 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 C4orf22Q6V702 233 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 PEX26Q7Z412 305 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 VWA5B2Q8N398 1253 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 MFSD3Q96ES6 412 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 KIFC1Q9BW19 673 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 SGPP1Q9BX95 441 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 PRTFDC1Q9NRG1 225 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 QPCTLQ9NXS2 382 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 TUBA8Q9NY65 449 aaPredicted RBP12.88□□□□□ -0.35
SMURF1-203ENST00000472627 SPRR3Q9UBC9 169 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 SH2B3Q9UQQ2 575 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 ATG4BQ9Y4P1 393 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
SMURF1-203ENST00000472627 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 SYCE3A1L190 88 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 DNAJB6O75190 326 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ERN1O75460 977 aaKnown RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ARNTP27540 789 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 HNF4AP41235 474 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 FOXO1Q12778 655 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 THOC5Q13769 683 aaKnown RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 CSHL1Q14406 222 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ZNF470Q6ECI4 717 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 PIWIL4Q7Z3Z4 852 aaKnown RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 SCUBE1Q8IWY4 988 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 SYCE1Q8N0S2 351 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 TC2NQ8N9U0 490 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 NAXEQ8NCW5 288 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 MORN4Q8NDC4 146 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 OR4K1Q8NGD4 311 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 OR8K3Q8NH51 312 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 OR14A16Q8NHC5 309 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 NEIL3Q8TAT5 605 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ZNF703Q9H7S9 590 aaPredicted RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 LIN28AQ9H9Z2 209 aaKnown RBP12.87□□□□□ -0.35
SMURF1-203ENST00000472627 PARVBQ9HBI1 364 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 ACKR4Q9NPB9 350 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 NDRG3Q9UGV2 375 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 TFR2Q9UP52 801 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 DHRS7Q9Y394 339 aa12.87□□□□□ -0.35
SMURF1-203ENST00000472627 TLN2Q9Y4G6 2542 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 LIASO43766 372 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CRLF1O75462 422 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 B3GALT4O96024 378 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 NPPBP16860 134 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 ENDOUP21128 410 aaKnown RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 HPDP32754 393 aaPredicted RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SCTRP47872 440 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CPA2P48052 419 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 HK2P52789 917 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 STXBP1P61764 594 aaKnown RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 BASP1P80723 227 aaKnown RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CBLBQ13191 982 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SLC22A10Q63ZE4 541 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SEM1Q6ZVN7 128 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CENPUQ71F23 418 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 ZNF595Q8IYB9 648 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CPNE9Q8IYJ1 553 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 DND1Q8IYX4 353 aaKnown RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 MYO1HQ8N1T3 1032 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 C7orf57Q8NEG2 295 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 GIMAP7Q8NHV1 300 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SLC22A8Q8TCC7 542 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SNF8Q96H20 258 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 GPR21Q99679 349 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 CCL19Q99731 98 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 AIF1LQ9BQI0 150 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 NPLQ9BXD5 320 aaPredicted RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 TRMT6Q9UJA5 497 aaKnown RBP12.86□□□□□ -0.35
SMURF1-203ENST00000472627 ADAM21Q9UKJ8 722 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
SMURF1-203ENST00000472627 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms