RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 AGBL2Q5U5Z8 902 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 YOD1Q5VVQ6 348 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 LIPMQ5VYY2 423 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 LIPJQ5W064 366 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SLC6A19Q695T7 634 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 HIST2H2AA3Q6FI13 130 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 MED27Q6P2C8 311 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SHISA6Q6ZSJ9 500 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 VN1R5Q7Z5H4 357 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 AMER2Q8N7J2 671 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 CCNYL1Q8N7R7 359 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 TRPV3Q8NET8 790 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 TTLQ8NG68 377 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 OR4F6Q8NGB9 312 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 OR2Y1Q8NGV0 311 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 NT5CQ8TCD5 201 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 CPT1CQ8TCG5 803 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 TRPC4APQ8TEL6 797 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 CREB3L4Q8TEY5 395 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SMAD5Q99717 465 aaKnown RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 NTMT1Q9BV86 223 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 PITHD1Q9GZP4 211 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 DRC3Q9H069 523 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 GSTO2Q9H4Y5 243 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 ZNF552Q9H707 407 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 NT5DC2Q9H857 520 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 SSU72Q9NP77 194 aaKnown RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 KCNK9Q9NPC2 374 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 OXSMQ9NWU1 459 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 GPR83Q9NYM4 423 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 CTSFQ9UBX1 484 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 ZNF490Q9ULM2 529 aaPredicted RBP8.64□□□□□ -1.03
SMC4-213ENST00000472282 RNF11Q9Y3C5 154 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 ZNF451Q9Y4E5 1061 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 NAV2Q8IVL1 2488 aa8.64□□□□□ -1.03
SMC4-213ENST00000472282 A0A0A6YYC8 382 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 ANKDD1BA6NHY2 528 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 C4orf51C9J302 202 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 TGFBR3LH3BV60 316 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 I3L1I5 382 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 SOCS6O14544 535 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 FFAR3O14843 346 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 TM9SF1O15321 606 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GPR42O15529 346 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 PRPF4O43172 522 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMC4-213ENST00000472282 FOXS1O43638 330 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 UGDHO60701 494 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 TRIM13O60858 407 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 OR4F21O95013 312 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ZWINTO95229 277 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ONECUT2O95948 504 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 OTCP00480 354 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 IL1RNP18510 177 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GSTM2P28161 218 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 DNAJB13P59910 316 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 HYAL2Q12891 473 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 LCP2Q13094 533 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 PWP1Q13610 501 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 DDX39BQ13838 428 aaKnown RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 MPP2Q14168 576 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 INPP5JQ15735 1006 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 NKG7Q16617 165 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 CPSF6Q16630 551 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMC4-213ENST00000472282 NDUFA9Q16795 377 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 PLEKHN1Q494U1 663 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 GGTA1PQ4G0N0 100 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 TTMPQ5BVD1 217 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 CFAP157Q5JU67 520 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GARNL3Q5VVW2 1013 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ZCCHC23Q6ZST2 131 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 FRMD7Q6ZUT3 714 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GPRIN3Q6ZVF9 776 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 PRSS41Q7RTY9 318 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 MILR1Q7Z6M3 343 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ATCAYQ86WG3 371 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 LAS2Q8IYD9 372 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 SHISA5Q8N114 240 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 RNF175Q8N4F7 328 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ARHGEF39Q8N4T4 335 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 FAM26EQ8N5C1 309 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ANKRD42Q8N9B4 389 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 L3MBTL4Q8NA19 623 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 OR7G3Q8NG95 312 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 UBE2E3Q969T4 207 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 C19orf60Q96EN9 201 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 ZNF382Q96SR6 550 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 SH3GL2Q99962 352 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GATA5Q9BWX5 397 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 MS4A8Q9BY19 250 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 AICDAQ9GZX7 198 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 RHBGQ9H310 441 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
SMC4-213ENST00000472282 ZNF225Q9UK10 706 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms