RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	TBCD	Q9BTW9	1192 aa		13.89	□□□□□ -0.19
SSR4-208	ENST00000471880	SORBS1	Q9BX66	1292 aa	Known RBP	13.89	□□□□□ -0.19
SSR4-208	ENST00000471880	AGPAT4	Q9NRZ5	378 aa		13.89	□□□□□ -0.19
SSR4-208	ENST00000471880	ANKRD10	Q9NXR5	420 aa		13.89	□□□□□ -0.19
SSR4-208	ENST00000471880	PCDHGA10	Q9Y5H3	936 aa		13.89	□□□□□ -0.19
SSR4-208	ENST00000471880	SPTBN1	Q01082	2364 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ICE1	Q9Y2F5	2266 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	E2F3	O00716	465 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	KLK8	O60259	260 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	CLDN9	O95484	217 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	TBX6	O95947	436 aa	Predicted RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	TNNI3	P19429	210 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	CPN2	P22792	545 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	GCA	P28676	217 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	SOX11	P35716	441 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	NEK2	P51955	445 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	HNRNPF	P52597	415 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	MRPL49	Q13405	166 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ZRSR2	Q15696	482 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ADPRM	Q3LIE5	342 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ACER2	Q5QJU3	275 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	FAM180A	Q6UWF9	173 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	IGFL2	Q6UWQ7	119 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	RPS27L	Q71UM5	84 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	CRLF3	Q8IUI8	442 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	BEST3	Q8N1M1	668 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	KIF2B	Q8N4N8	673 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	SLC5A8	Q8N695	610 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ACOT4	Q8N9L9	421 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	GALNT11	Q8NCW6	608 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	TMEM52	Q8NDY8	209 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	PRR7	Q8TB68	274 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	THAP3	Q8WTV1	239 aa	Predicted RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	RGMA	Q96B86	450 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	NSUN5	Q96P11	429 aa	Known RBP	13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	MAPKAP1	Q9BPZ7	522 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	CDCP1	Q9H5V8	836 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	MMP25	Q9NPA2	562 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	DMRT3	Q9NQL9	472 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	ADGRE2	Q9UHX3	823 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	DAPP1	Q9UN19	280 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	MMACHC	Q9Y4U1	282 aa		13.88	□□□□□ -0.19
SSR4-208	ENST00000471880	TRAV17	A0A0B4J275	112 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	TCRBV16S1A1N1	A0A5B0	115 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	OR5H15	A6NDH6	313 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	SAGE2P	A6NJ88	616 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	TCP11X1	B4DZS4	312 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	PYGB	P11216	843 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	KRT15	P19012	456 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	HIST1H1T	P22492	207 aa	Predicted RBP	13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	ATP5A1	P25705	553 aa	Known RBP	13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	PPP2R1B	P30154	601 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	TNFSF10	P50591	281 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	ID2	Q02363	134 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	SLAMF1	Q13291	335 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	MEP1A	Q16819	746 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	OR4C11	Q6IEV9	310 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	CYP20A1	Q6UW02	462 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	ZNF793	Q6ZN11	406 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	MILR1	Q7Z6M3	343 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	ZNF595	Q8IYB9	648 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	OR52B6	Q8NGF0	335 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	DEFB126	Q9BYW3	111 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	L2HGDH	Q9H9P8	463 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	PRDM7	Q9NQW5	492 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	KLHL1	Q9NR64	748 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	TMEM216	Q9P0N5	145 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	PCTP	Q9UKL6	214 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	NTNG1	Q9Y2I2	539 aa		13.87	□□□□□ -0.19
SSR4-208	ENST00000471880	USP9Y	O00507	2555 aa	Predicted RBP	13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	TRBV11-1	A0A0K0K1C0	115 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880		A8MT66	165 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	STX16-NPEPL1	H3BU86	382 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	OR7A17	O14581	309 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	STX16	O14662	325 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	LDB3	O75112	727 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	SUPT7L	O94864	414 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	AGFG2	O95081	481 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	SHBG	P04278	402 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	PTX3	P26022	381 aa	Predicted RBP	13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	PIK3CB	P42338	1070 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	TSFM	P43897	325 aa	Known RBP	13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	CDH13	P55290	713 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	HSD17B7	P56937	341 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	IFT88	Q13099	833 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	DEPDC1	Q5TB30	811 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	UBE3D	Q7Z6J8	389 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	GRHL3	Q8TE85	626 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	HAS2	Q92819	552 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	UTP23	Q9BRU9	249 aa	Known RBP	13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	TXLNGY	Q9BZA5	131 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	ELOVL6	Q9H5J4	265 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	CLCA3P	Q9Y6N3	262 aa		13.86	□□□□□ -0.19
SSR4-208	ENST00000471880	IGKV3D-11	A0A0A0MRZ8	115 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	TLDC2	A0PJX2	215 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	GABRR3	A8MPY1	467 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	CYSRT1	A8MQ03	144 aa		13.85	□□□□□ -0.19
SSR4-208	ENST00000471880	FOXO6	A8MYZ6	492 aa		13.85	□□□□□ -0.19

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