RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 KEAP1Q14145 624 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 EXOSC7Q15024 291 aaKnown RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 P2RY6Q15077 328 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 CEP55Q53EZ4 464 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 PDLIM3Q53GG5 364 aaPredicted RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 LIPJQ5W064 366 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 TRIM65Q6PJ69 517 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 ADAD2Q8NCV1 583 aaKnown RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 OR6M1Q8NGM8 313 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 OR4C3Q8NH37 302 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 SMPDL3AQ92484 453 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 RPGRIP1Q96KN7 1286 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 SLC26A1Q9H2B4 701 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 HACD3Q9P035 362 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 VPS54Q9P1Q0 977 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 POLKQ9UBT6 870 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 MYH14Q7Z406 1995 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 SH3PXD2BA1X283 911 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TRIM49BA6NDI0 452 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 E2F3O00716 465 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 CHEK1O14757 476 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 GMFGO60234 142 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 ECE2O60344 883 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 KRT8P05787 483 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 THRBP10828 461 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 PAICSP22234 425 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 PSMA5P28066 241 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 CEACAM8P31997 349 aaPredicted RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 GBX2P52951 348 aaPredicted RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 CNTN1Q12860 1018 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 SNTB2Q13425 540 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 BTG3Q14201 252 aaPredicted RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 GRB14Q14449 540 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 ADPRMQ3LIE5 342 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TECRLQ5HYJ1 363 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMC5-202ENST00000471372 C16orf82Q7Z2V1 217 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TEX26Q8N6G2 289 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TCEANCQ8N8B7 351 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 CCDC197Q8NCU1 140 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 OR13A1Q8NGR1 328 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 GPR148Q8TDV2 347 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 U2AF1L4Q8WU68 220 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 MCHR2Q969V1 340 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TMEM45BQ96B21 275 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 ERGIC2Q96RQ1 377 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 CCM2Q9BSQ5 444 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TMEM117Q9H0C3 514 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 BICC1Q9H694 974 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 EVA1AQ9H8M9 152 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 INTS9Q9NV88 658 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 GTSE1Q9NYZ3 720 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 TECRQ9NZ01 308 aaKnown RBP5.91□□□□□ -1.46
SMC5-202ENST00000471372 ZNF319Q9P2F9 582 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 CHRNA9Q9UGM1 479 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 HPCAL4Q9UM19 191 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 PPP2R2CQ9Y2T4 447 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 ZMYM6O95789 1325 aa5.91□□□□□ -1.46
SMC5-202ENST00000471372 ARID2Q68CP9 1835 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 A0A1B0GUL7 405 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 C16orf97H3BN30 126 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 P2RX6O15547 441 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 KRT86O43790 486 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 EXTL3O43909 919 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CYTIPO60759 359 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CSO75390 466 aaKnown RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 TOM1L1O75674 476 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 NGFP01138 241 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 GPIP06744 558 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 GPX3P22352 226 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CTNNA2P26232 953 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CCR4P51679 360 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 LIMK2P53671 638 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CHIT1Q13231 466 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 KRT81Q14533 505 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 DUSP5Q16690 384 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 NADK2Q4G0N4 442 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 TMEM41BQ5BJD5 291 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 HIST2H2AA3Q6FI13 130 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 TCEAL6Q6IPX3 200 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 CAPN13Q6MZZ7 669 aaPredicted RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 FCRLAQ7L513 359 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 GRAMD2AQ8IUY3 354 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 WDR49Q8IV35 697 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 OR52M1Q8NGK5 317 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 OR1L3Q8NH93 324 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 APOBEC4Q8WW27 367 aaKnown RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 P3H4Q92791 437 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 ZNF274Q96GC6 653 aaPredicted RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 ZNF479Q96JC4 524 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 LPAR4Q99677 370 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 NACA2Q9H009 215 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 FAM49AQ9H0Q0 323 aaPredicted RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 RMND5AQ9H871 391 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.9□□□□□ -1.46
SMC5-202ENST00000471372 FLRT3Q9NZU0 649 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 DBF4Q9UBU7 674 aaPredicted RBP5.9□□□□□ -1.46
SMC5-202ENST00000471372 SNX6Q9UNH7 406 aa5.9□□□□□ -1.46
SMC5-202ENST00000471372 DIMT1Q9UNQ2 313 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms