RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 MIEF2Q96C03 454 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 SLC26A1Q9H2B4 701 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 AKTIPQ9H8T0 292 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 TAS2R1Q9NYW7 299 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 CTSFQ9UBX1 484 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 FAM208BQ5VWN6 2430 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 ATMQ13315 3056 aa18.37■□□□□ 0.53
PCGF3-208ENST00000470161 IGSF10Q6WRI0 2623 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 EIF4E1BA6NMX2 242 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 NSA2O95478 260 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 IL1RNP18510 177 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 GSTM2P28161 218 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 MXRA7P84157 204 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 TRAF3Q13114 568 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 NKG7Q16617 165 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 METTL2BQ6P1Q9 378 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 SCIMPQ6UWF3 145 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 CHSY3Q70JA7 882 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 LARP4Q71RC2 724 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 COX15Q7KZN9 410 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 MYLK4Q86YV6 388 aaPredicted RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 RBM15BQ8NDT2 890 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 OR9A4Q8NGU2 314 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 STT3BQ8TCJ2 826 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 TTC9Q92623 222 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 UBE2E3Q969T4 207 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 IP6K3Q96PC2 410 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 CADM1Q9BY67 442 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 SOX17Q9H6I2 414 aaPredicted RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 RALYQ9UKM9 306 aaKnown RBP18.36■□□□□ 0.53
PCGF3-208ENST00000470161 MAP4K5Q9Y4K4 846 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 SLC22A7Q9Y694 548 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 CCDC88CQ9P219 2028 aa18.36■□□□□ 0.53
PCGF3-208ENST00000470161 LOC100653049A0A140TA62 436 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 H0YIG0 161 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 UBDO15205 165 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 FOXS1O43638 330 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 KRT34O76011 436 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 CHEK2O96017 543 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 OTCP00480 354 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 PRDX6P30041 224 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 HNF4AP41235 474 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 NIPAL1Q6NVV3 410 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 SHISA6Q6ZSJ9 500 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 ARHGEF39Q8N4T4 335 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 NT5CQ8TCD5 201 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 CMTM5Q96DZ9 223 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 WBP1Q96G27 269 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 NT5DC2Q9H857 520 aa18.35■□□□□ 0.53
PCGF3-208ENST00000470161 MKKSQ9NPJ1 570 aaPredicted RBP18.35■□□□□ 0.53
PCGF3-208ENST00000470161 MRPS2Q9Y399 296 aaKnown RBP18.35■□□□□ 0.53
PCGF3-208ENST00000470161 A8MUI8 341 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 PEX12O00623 359 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 CNOT3O75175 753 aaKnown RBP18.34■□□□□ 0.53
PCGF3-208ENST00000470161 ZGLP1P0C6A0 271 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 ALOX12P18054 663 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 HTR6P50406 440 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
PCGF3-208ENST00000470161 MILR1Q7Z6M3 343 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SNX32Q86XE0 403 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■■■■ 163.7
PCGF3-208ENST00000470161 PRSS58Q8IYP2 241 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 TUBGCP3Q96CW5 907 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 WDR34Q96EX3 536 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 ACTR8Q9H981 624 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 NAALAD2Q9Y3Q0 740 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SGK494L7N484 410 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SLC22A2O15244 555 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 GSC2O15499 205 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 ALDOCP09972 364 aaKnown RBP18.34■□□□□ 0.53
PCGF3-208ENST00000470161 CASP2P42575 452 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 CUL3Q13618 768 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SQLEQ14534 574 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 VWA2Q5GFL6 755 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 LSM14AQ8ND56 463 aaKnown RBP18.34■□□□□ 0.53
PCGF3-208ENST00000470161 METTL6Q8TCB7 284 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 VPS50Q96JG6 964 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 SPSB2Q99619 263 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 CRB3Q9BUF7 120 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 KCNMB2Q9Y691 235 aa18.34■□□□□ 0.53
PCGF3-208ENST00000470161 VSTM2BA6NLU5 285 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 ATXN7O15265 892 aaPredicted RBP18.33■□□□□ 0.52
PCGF3-208ENST00000470161 WFS1O76024 890 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 KLHL18O94889 574 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 IGHEP01854 428 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 ZNF888P0CJ79 500 aaPredicted RBP18.33■□□□□ 0.52
PCGF3-208ENST00000470161 EPORP19235 508 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 HMOX2P30519 316 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 FOXL2P58012 376 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 KLC1Q07866 573 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 DEFB134Q4QY38 66 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 XKR7Q5GH72 579 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 MED27Q6P2C8 311 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 PRSS41Q7RTY9 318 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 AMER3Q8N944 861 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 ADAMTS17Q8TE56 1095 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 NACC2Q96BF6 587 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 C14orf105Q9NVL8 296 aa18.33■□□□□ 0.52
PCGF3-208ENST00000470161 PIEZO2Q9H5I5 2752 aa18.32■□□□□ 0.52
PCGF3-208ENST00000470161 SCN3AQ9NY46 2000 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms